KEGG   Paraclostridium bifermentans: KXZ80_12920
Entry
KXZ80_12920       CDS       T07479                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pbif  Paraclostridium bifermentans
Pathway
pbif00300  Lysine biosynthesis
pbif00470  D-Amino acid metabolism
pbif01100  Metabolic pathways
pbif01110  Biosynthesis of secondary metabolites
pbif01120  Microbial metabolism in diverse environments
pbif01230  Biosynthesis of amino acids
Module
pbif_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pbif00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    KXZ80_12920 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    KXZ80_12920 (dapF)
Enzymes [BR:pbif01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     KXZ80_12920 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: UAG17668
LinkDB
Position
complement(2672665..2673495)
AA seq 276 aa
MNFWKLHGVGNDFIAIDGRFDNKDSNDYSDLAKKVCHRRFGVGADGLLVVKTSDISDVEM
VYYNSDGSRANMCGNGLRCFCKFVYDNNIVKDTEFSVYTLDGIKKISLNIESEKNYTISV
NMGKPNFNPKNIPVNTNKEVFIKEKLLIDNKEVEVSSILMGVPHTIVFVDELIKEDIYKY
GKLIEENEIFPNKTNVNFVKIDDKDNIHVYTWERGCGYTLGCGTGMTASVILANYLGKTN
EIVNVKSEGGSVRIELLDDVYMIGNAVKICEGTLEV
NT seq 831 nt   +upstreamnt  +downstreamnt
atgaacttctggaaattacatggagtcggaaatgattttatagcaattgacggtaggttt
gataataaagattctaacgactactcagatttagctaaaaaagtgtgtcatagaagattt
ggcgttggagctgatggactactagtagttaaaacctctgatatatctgatgtagaaatg
gtatattataattctgatggatcaagagctaatatgtgtggaaatggattaagatgtttt
tgtaagtttgtgtatgacaataacatagtaaaagatacagaatttagtgtatacacactt
gacggaataaaaaaaatatctttaaatatagaaagtgaaaaaaattatactataagcgta
aatatgggaaaaccaaatttcaatccaaaaaacattccagtaaatacaaataaagaagtc
tttataaaagaaaagctattaatagataataaagaagtagaagtaagttcaattctaatg
ggagtgccacatactattgtattcgtagatgaacttataaaagaagatatatataaatat
ggaaaacttatagaagaaaatgaaattttcccaaataaaactaatgttaattttgttaaa
attgatgataaagataacatacatgtatacacatgggaaagaggatgcggatatactcta
ggatgtgggacaggtatgacagcttctgtaattttagctaactatttaggtaaaactaat
gaaatagttaatgtaaaatcagaaggcggaagcgtaaggatagagcttcttgatgatgta
tatatgataggaaatgcagttaaaatatgtgaaggaactttggaggtatag

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