Paraclostridium bifermentans: KXZ80_12920
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Entry
KXZ80_12920 CDS
T07479
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pbif
Paraclostridium bifermentans
Pathway
pbif00300
Lysine biosynthesis
pbif00470
D-Amino acid metabolism
pbif01100
Metabolic pathways
pbif01110
Biosynthesis of secondary metabolites
pbif01120
Microbial metabolism in diverse environments
pbif01230
Biosynthesis of amino acids
Module
pbif_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pbif00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KXZ80_12920 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KXZ80_12920 (dapF)
Enzymes [BR:
pbif01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KXZ80_12920 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
UAG17668
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Position
complement(2672665..2673495)
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AA seq
276 aa
AA seq
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MNFWKLHGVGNDFIAIDGRFDNKDSNDYSDLAKKVCHRRFGVGADGLLVVKTSDISDVEM
VYYNSDGSRANMCGNGLRCFCKFVYDNNIVKDTEFSVYTLDGIKKISLNIESEKNYTISV
NMGKPNFNPKNIPVNTNKEVFIKEKLLIDNKEVEVSSILMGVPHTIVFVDELIKEDIYKY
GKLIEENEIFPNKTNVNFVKIDDKDNIHVYTWERGCGYTLGCGTGMTASVILANYLGKTN
EIVNVKSEGGSVRIELLDDVYMIGNAVKICEGTLEV
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaacttctggaaattacatggagtcggaaatgattttatagcaattgacggtaggttt
gataataaagattctaacgactactcagatttagctaaaaaagtgtgtcatagaagattt
ggcgttggagctgatggactactagtagttaaaacctctgatatatctgatgtagaaatg
gtatattataattctgatggatcaagagctaatatgtgtggaaatggattaagatgtttt
tgtaagtttgtgtatgacaataacatagtaaaagatacagaatttagtgtatacacactt
gacggaataaaaaaaatatctttaaatatagaaagtgaaaaaaattatactataagcgta
aatatgggaaaaccaaatttcaatccaaaaaacattccagtaaatacaaataaagaagtc
tttataaaagaaaagctattaatagataataaagaagtagaagtaagttcaattctaatg
ggagtgccacatactattgtattcgtagatgaacttataaaagaagatatatataaatat
ggaaaacttatagaagaaaatgaaattttcccaaataaaactaatgttaattttgttaaa
attgatgataaagataacatacatgtatacacatgggaaagaggatgcggatatactcta
ggatgtgggacaggtatgacagcttctgtaattttagctaactatttaggtaaaactaat
gaaatagttaatgtaaaatcagaaggcggaagcgtaaggatagagcttcttgatgatgta
tatatgataggaaatgcagttaaaatatgtgaaggaactttggaggtatag
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