Paenibacillus beijingensis: VN24_15235
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Entry
VN24_15235 CDS
T03802
Name
(GenBank) RNA polymerase sigma70
KO
K03090
RNA polymerase sigma-B factor
Organism
pbj
Paenibacillus beijingensis
Brite
KEGG Orthology (KO) [BR:
pbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbj03021
]
VN24_15235
Transcription machinery [BR:
pbj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VN24_15235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
HTH_10
HTH_23
HTH_38
GerE
HTH_3
HTH_24
KORA
DUF1492
HTH_Tnp_ISL3
Trp_repressor
HTH_Tnp_4
DUF5817_CT
Motif
Other DBs
NCBI-ProteinID:
AJY75663
UniProt:
A0A0D5NL81
LinkDB
All DBs
Position
complement(3378075..3378857)
Genome browser
AA seq
260 aa
AA seq
DB search
MTMQPARQSPQAGTALILEYQSNPNNETATLLIELYEPMVKMASGKIARNRPDLYEDLYQ
VGQMALLRLFAQFDASMGVQFEPYAMKSIIGHMKNYLRDKSWYIQVPRRIKEKGIAVQQA
IDELTVSLERSPKVEEIAEKMDLTVEETLEILGGRDLYHYISLDTPISEDESTTTLGELI
GSQADDFDSVDKKMDLQAALSQLKPEEQQVLELAFEEGIPQRLIADRLGVSQMSISRIQR
RAIEKLKRLLSEDGHLYDES
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgcagccggctaggcaatcgcctcaggcgggcacagccctgattctggaatac
cagagcaaccccaataacgaaacagccaccctcctgattgagctatatgagccaatggta
aagatggcttccggtaaaatcgcccggaaccggcccgatctgtatgaagatctatatcag
gtcggccagatggcgctgctgcggctgtttgcccagtttgacgccagcatgggcgttcag
ttcgaaccttatgccatgaagagcatcatcggccatatgaaaaattatttgcgcgataaa
tcgtggtacattcaagttccccggcgcatcaaggaaaaaggcattgccgtccagcaagcg
atcgacgagcttaccgtcagtttggaacggtctcccaaagtcgaggagatagccgagaaa
atggatctgaccgttgaggaaacgcttgaaattctcggcggacgcgatctgtatcattat
atttccctcgatacgccgatttccgaagacgagagcacgacgactctcggcgagcttatc
ggatcgcaggcggacgatttcgattccgtcgacaagaagatggatttgcaggccgccttg
tcccaattgaaacccgaagaacagcaggtgctggagctcgccttcgaggaaggcatcccg
cagcgtttgatcgccgaccgcttgggcgtatcgcaaatgagcatttcgcgcatccagcgg
cgggcgatcgagaagctgaaacggcttctctccgaggacggacatctttacgatgagtca
taa
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integrated database retrieval system
