Paenibacillus beijingensis: VN24_16885
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Entry
VN24_16885 CDS
T03802
Name
(GenBank) antiporter
KO
K08168
MFS transporter, DHA2 family, metal-tetracycline-proton antiporter
Organism
pbj
Paenibacillus beijingensis
Brite
KEGG Orthology (KO) [BR:
pbj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbj02000
]
VN24_16885
01504 Antimicrobial resistance genes [BR:
pbj01504
]
VN24_16885
Transporters [BR:
pbj02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-2 (14 spanner) (DHA2) family [TC:
2.A.1.3
]
VN24_16885
Antimicrobial resistance genes [BR:
pbj01504
]
Gene variants
Tetracycline resistance genes
Transporters
VN24_16885
Gene sets
Vancomycin resistance modules
Tetracycline resistance, efflux pump Tet38 [MD:
M00704
]
VN24_16885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_4
DUF697
OATP
Motif
Other DBs
NCBI-ProteinID:
AJY77806
UniProt:
A0A0D5NR96
LinkDB
All DBs
Position
complement(3738884..3740278)
Genome browser
AA seq
464 aa
AA seq
DB search
MEAKAKLEAKVEAGVQQQTGEKIIRILSFTLVISVMSATMFNIVLPEIRAEFHLSFSQVS
WISSAFLLIYAIGTLIFGKLADIYKLKDLLTFGLLFFALGSMVGLAAQAYWMVLLGRILQ
AVGAAVIPATAGMIPIRYFPPENRGRALGITMTGLAIGSAAGPAVAALVVSTVHWRWLFC
MPLLTLLALPYYRKYLDDERGKTGKIDWIGGGLLAGTAALLLLAITYEAWMPAAGCLILF
LLFAVRIRIAPEPFIRPGLFRNKSYSLVLAIAFLTTGIGYSLPFLSPQLLTDVSHLAPGA
VGFVMVPAAVTTAVLGRKGGKLADAKGNSTLFYTASSLLLVCFILLSSFAGISPVFIAIF
LIFGQVGQSFIYIAFSNAISRTLPKEQTGVGMGLLSMLNFIAGAVSAAVYSKVVDQGSET
HWNPANSHPEALVYSNLYLVLAILHVMIFLVYYFQFGRVKRKAA
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgaaagctaaattggaagcgaaagtggaagccggagttcagcagcaaacagga
gaaaaaatcattcgtattctctcattcacgcttgtcatctccgtaatgagcgcaacgatg
ttcaatatcgtattgcccgagatccgggcggaatttcatctttccttctcgcaagtaagc
tggatttcatccgcttttttgctgatctacgcaatcgggaccttgatcttcggcaagctg
gccgacatctataagctcaaagatttgctgacgttcggccttcttttttttgctctcgga
tcgatggtcggattggccgcccaagcctattggatggttctcctcggccggatattacag
gcagtaggggctgcagttattccggcaacggccggaatgattccgattcgctactttccg
ccggagaatcggggacgcgccttgggaataacgatgaccgggctggcgattggcagcgcg
gcgggcccggccgtcgccgccttagtcgttagtacagttcattggcggtggttgttctgc
atgccgcttcttacgctgctcgcgctgccgtattaccgcaaatatttggatgatgaacgc
gggaagacgggtaaaatcgattggatcggcggcggactgcttgccggtacggcggctttg
ctgcttctggcgattacgtatgaagcgtggatgccggcagccggatgcctgatcctgttc
ctattgtttgcggtaagaattcgaattgcgcccgaaccttttattcgtcccggcctgttc
agaaataaaagctattcgcttgtactggcaattgcttttttgacgaccgggatcgggtac
tcgctcccgtttttgagcccacagctgctgaccgatgtcagtcatctcgctccgggagcg
gttggcttcgtaatggtacccgccgcagtcacgacagcagtcctgggacgaaaaggcggc
aaattggcagacgccaaaggcaattcgactctattctatacggcatcctcgctgctgctt
gtttgttttattctattatcttcttttgccggaatctcccctgtttttattgccatcttt
ctaatcttcggccaagtgggacaatcgttcatttatatcgctttctccaatgcgatttcc
cggacgctgcccaaggaacagaccggtgtaggcatgggtctgctttcgatgctgaacttt
attgccggtgccgtttccgcagctgtttacagcaaggtcgtggatcaaggttccgaaacg
cattggaacccggcgaattcgcatccggaagcgctcgtatacagcaatctgtatctcgtt
ctcgcgattttgcatgtgatgatatttttggtctattattttcaattcggcagagtgaag
cgcaaagcggcttag
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