Paenibacillus beijingensis: VN24_18155
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Entry
VN24_18155 CDS
T03802
Name
(GenBank) RNA polymerase sigma70
KO
K05346
deoxyribonucleoside regulator
Organism
pbj
Paenibacillus beijingensis
Brite
KEGG Orthology (KO) [BR:
pbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbj03000
]
VN24_18155
Transcription factors [BR:
pbj03000
]
Prokaryotic type
Other transcription factors
Others
VN24_18155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar-bind
HTH_Crp_2
HTH_23
Sigma70_r4_2
HTH_24
HTH_3
Sigma70_r4
GntR
HTH_11
HTH_28
MarR_2
HVO_A0261_N
UPF0122
LacI
HTH_IclR
HTH_38
HTH_5
MarR
DUF7343
TrmB
DUF134
Terminase_5
HTH_29
DeoRC
HTH_37
Crp
Xre-like-HTH
HTH_10
HTH_ParB
Fe_dep_repress
HTH_Tnp_4
HTH_40
HTH_6
HTH_AsnC-type
HTH_36
Sigma70_ECF
HTH_22
HTH_31
HTH_17
NirdL-like_HTH
DUF1804
DNA_pol3_delta_C
HTH_Tnp_1_2
Motif
Other DBs
NCBI-ProteinID:
AJY76129
UniProt:
A0A0D5NLD9
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All DBs
Position
4026734..4027690
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AA seq
318 aa
AA seq
DB search
MAEERGEEKQAKMVDAARMYYQLDYSQQEIAQKLGVSRPTVSRFLQQAKDEGIVQIKIVD
PKENNSHYAQQLEHKFRLKKAVVVSVPQYDDSTVKKYLGEAAALYLHEIVKDGDTIAATW
GTTLYEVATRLQNKHVRGVKVVQLNGGVSHTNTNTYAHEIVHLFGKAFHTNPYFIPLPAI
VDHSVVKLAIEADRHIRSILEMGKQANIAMVTVGAPTEDSVLIKADYFSESDLRMIYEKG
AGDICSRYIDIQGKLISAELNQRTIGIDLEELQQKEQSILVAGGPKKVDAVYGALNGKYT
NVLITDSFTAKYLLEREQ
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaacgaggagaggaaaaacaggccaagatggtcgatgcggcccggatgtat
taccagttggactacagtcagcaggagatcgcccagaagctcggcgtttcccggcctacc
gtttcccgatttttgcagcaggcgaaggacgagggcatcgtacagatcaaaatcgtcgat
cccaaagagaacaacagccattacgcgcagcagctggagcataaattccggctcaagaag
gctgtcgtcgtctccgttccgcagtatgacgattcgacggtcaaaaagtatttgggcgaa
gcggcggcattgtacttgcacgaaatcgtcaaagacggggatacgatcgccgcaacctgg
ggcacgacgctttatgaggttgccacccggctgcaaaataagcatgttcgcggcgtaaaa
gtcgttcagctgaacggaggagtcagccatacgaatacgaacacgtacgcgcatgaaatc
gtccatttgttcggcaaggcgtttcatacgaatccttattttattccgctgccggcgatt
gtcgatcattccgtcgtcaagcttgccattgaagcggatcgtcatatccgcagcattttg
gaaatgggcaagcaggccaacattgcgatggtaacggtaggggctccgacagaggactcg
gttctgatcaaggcggactatttttccgaatcggatttgcggatgatctatgaaaaaggc
gccggagacatttgttcccgttatatcgatattcaaggcaaactgatcagcgcggagctc
aatcaaagaacgatcggaatcgatctggaggagctgcaacagaaggagcagtctattctg
gtggccggcggtccgaagaaggtcgatgccgtttacggagcgttaaacgggaaatataca
aatgtgctcattacggacagctttaccgcgaaatatttattggaacgggagcaatga
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integrated database retrieval system