Parvularcula bermudensis: PB2503_04367
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Entry
PB2503_04367 CDS
T01298
Name
(GenBank) putative DNA polymerase III, epsilon subunit and related 3'-5'exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pbr
Parvularcula bermudensis
Pathway
pbr03030
DNA replication
pbr03430
Mismatch repair
pbr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PB2503_04367
03430 Mismatch repair
PB2503_04367
03440 Homologous recombination
PB2503_04367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbr03032
]
PB2503_04367
03400 DNA repair and recombination proteins [BR:
pbr03400
]
PB2503_04367
Enzymes [BR:
pbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PB2503_04367
DNA replication proteins [BR:
pbr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PB2503_04367
DNA repair and recombination proteins [BR:
pbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PB2503_04367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ADM08948
UniProt:
E0TER5
LinkDB
All DBs
Position
complement(804591..805328)
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AA seq
245 aa
AA seq
DB search
MRQIVFDTETTGLDPLDGHRVVEIGAVEMVNGALTGRTFHVYVNPERDMPEAAYRVHKLS
SQFLADKPIFKDPAIGQAFYQFCEGAVLVAHNASFDCKFMQHHLDEIGLPWAWGEPGDIV
DTLQIARKRFPGSPSSLDALCQRFGIDLTEREAQGHGALLDSRLLAEVYIELTGGRQGGL
IFDPDQSVGGRRKARGEPARQRPGPRPQLLTDEEHAAHAALIGEMKDPLWARYTADAVTD
RSRGG
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagattgtattcgataccgaaacgaccggattagatccgcttgacggccaccgg
gtcgtcgaaatcggggctgtggaaatggtgaatggggcgctgaccgggcgcacattccac
gtctatgtgaaccccgaacgggatatgccggaggccgcctatcgcgttcataaattgtca
tcgcaatttctggccgacaagccgattttcaaagaccccgcgattgggcaggctttctat
caattttgcgaaggcgccgttctggtcgcgcataatgccagctttgactgcaaattcatg
cagcatcatttggacgagatcggccttccatgggcatggggcgaacccggcgatatcgtc
gatacgttgcaaatcgcgcggaaacgctttcccggttcgccatcctccctcgatgcgctg
tgtcaacgcttcggcatcgatctgaccgaacgcgaagcgcaaggacacggcgcgctgctc
gattcgcgcttattggccgaggtctatatcgaactgaccggcggtcggcagggcgggctg
atcttcgaccccgatcaatccgttgggggacgacgcaaagctaggggggagcccgcccgt
cagcgtccaggaccccgtccccaattgctcaccgacgaggaacatgcggcccatgccgcc
cttatcggcgagatgaaggacccgctctgggcgcgctatacggctgacgctgttacggat
cggtcgcggggggggtga
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