KEGG   Parvularcula bermudensis: PB2503_08419
Entry
PB2503_08419      CDS       T01298                                 
Name
(GenBank) ribonucleotide-diphosphate reductase alpha subunit
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
pbr  Parvularcula bermudensis
Pathway
pbr00230  Purine metabolism
pbr00240  Pyrimidine metabolism
pbr01100  Metabolic pathways
pbr01232  Nucleotide metabolism
Module
pbr_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
pbr_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:pbr00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    PB2503_08419
   00240 Pyrimidine metabolism
    PB2503_08419
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbr03400]
    PB2503_08419
Enzymes [BR:pbr01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     PB2503_08419
DNA repair and recombination proteins [BR:pbr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    PB2503_08419
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TSCPD Ribonuc_red_lgN TACO1_YebC_N Dsc3_C
Other DBs
NCBI-ProteinID: ADM09739
UniProt: E0TBE2
LinkDB
Position
complement(1666643..1670233)
AA seq 1196 aa
MKITRRFSEIGTPYRDVSFVPRESRLGDRALLITAPDNWSQMAVDILAQKYLRRDNVPSA
TIRCKAGDEPSELTPRQAAPGSGVGHESDAEAVFDRLAGAWAFHGWQQGIFDDADDAIAF
RDELCAMMATQRAAPNSPQWFNTGLHWAYGIAADGSGHFRYDPSVEKIVEVDNVYAYPQP
HACFIQSVSDSLVGENGIFDLWSREARLFKYGSGSGSNFSAIRGEDEPLAGGGKSSGLIS
FLKVGDTAAGAIKSGGITRRAAKMVVLDIDHPDIENFIDWKVKEEQKVAALVTGSLVTKR
HVEAMFAAIKRGDEDDRLDPTRNEILRRVMKAARRDGVPDGIIGRALSLAASGRTEMPLD
VYTVGWDDEAYRTVSGQNANNSIRLTGEFLVAVDDDQQWPLTRRTDGGVHKSVSARALWE
KIGEAAWASADPGLQFHDTINDWHTCPMDGDIEASNPCSEYMFLNDTACNLASINLLAFL
QEDGELDLDGLIHTIRLWTIVLEISVGMASYPDARIAQRSYDYRTLGLGFANLGGLLMSA
ALPYDSDRGRAAAGALSALMTAIAYKTSADLAARLGPFPRFDANKEAVLRVMRNHRAALT
GDDFDDLSVTPPRFDEGAVPFAGLVAAASSAWDEAISKAERSGVRNAQVTAIAPTGTIGL
VMDCDTTGIEPDFALVKFKQLAGGGTVRLINQSVPRALARLGYTDQQIREIKAFAVGHGS
LDHAPGVSFDDLRREGFSDREIDKLRAALPQAFDISFAFTKDVLGEAFLRGTLHLNDAQL
DQSGYALLRELGFSDEDIHRANLFCCGTMTVEGAPHLQPEHYAIFDCATQCGRTGTRSLS
VAAHIDMMAACQPFISGGISKTVNLPHRATVEDCVKTYRAAYHRGLKSISLYRDGSKLSQ
PLTGVLLANDDLGEDDLLNQPAGEKARVFAERVVERIVERAPGRRRLPDRRKGYIQKAIV
GGHKVYLHTGEFEDGELGEIFVDMHKEGAAFRSLMNNFAIAISLGLQYGVPLEEFVDAYL
FTRFEPAGPVQGNDRIKNATSILDYIFRELAISYLGRNDLGHVPDNGSAFDVGRGVDAEG
VQQEAQRLISKGFSRSSTMDNLVVLRGGEFDRLRRERTEVEGDGAINDDEPVRPTETAAQ
DPAEHKGRLADPSNARQVAKMKGYEGDACGECGQFTLVRTGTCLRCDSCGYSSGCS
NT seq 3591 nt   +upstreamnt  +downstreamnt
atgaaaatcacacgccgcttctccgaaattggcacgccctaccgggatgtttccttcgta
cccagagaaagcagattgggagatcgcgccctcctgatcacagcgcctgacaattggtcg
cagatggcggtcgatattttggcgcaaaaatatcttcgccgggacaacgtaccaagcgca
accatcaggtgtaaagcgggggatgagccgtcggagctgaccccgcgacaggcggccccg
ggcagcggcgtcggccatgagagcgatgccgaggcggtgttcgaccgcctggcgggcgct
tgggcttttcatgggtggcagcagggcattttcgatgacgcagacgacgcgatcgcgttt
cgcgacgagctctgcgccatgatggcgacccaacgcgcggcgccgaattctccacaatgg
ttcaacacagggttgcattgggcctatggcatcgccgcggacggtagtggccatttccgc
tatgatccgtcggtggagaaaattgtcgaggtcgacaatgtctacgcctatccgcagccc
catgcgtgcttcattcaatcggtttccgactccctcgtgggcgagaacggtattttcgac
ctctggtcacgggaagcgcggctctttaaatatgggtcaggatcgggatcgaacttctcc
gccattcgcggcgaggacgagcctttagccgggggcgggaaatcttccgggcttatctcc
tttctcaaggtcggcgacaccgccgcaggcgccattaagtcggggggcattacccgccgc
gcggcgaaaatggtggtgctcgatatcgatcacccggatatcgagaacttcatcgactgg
aaggtgaaagaggaacaaaaagtcgccgccctggtgaccggaagcctcgtcaccaaacgc
catgttgaggcaatgtttgcggcaataaagaggggggacgaggacgaccgtctcgatccg
acccgaaacgaaatcctccgtcgcgtgatgaaagccgcccggcgggatggcgtccccgac
ggcatcatcggccgcgcgctctcacttgcggcctcaggccggacggagatgccgctcgat
gtctatacagtcggctgggacgacgaagcctatcgaaccgtcagtggtcagaatgccaat
aattccatcagattgaccggtgaattcctggtggcggtcgatgacgatcagcaatggcct
ttgacgcggcgcaccgatggcggtgtccataaatccgtttccgcccgcgccctgtgggag
aagatcggtgaggccgcctgggcgagcgccgatccgggtctacagttccacgacacgatc
aacgattggcatacctgccccatggatggcgatatcgaggcgtccaatccgtgttcggag
tacatgttcctgaacgacaccgcctgtaatcttgcctcgatcaatcttctcgccttcctg
caggaggatggcgagcttgatcttgacgggctgatccacaccatccgcctctggacgatc
gtcctcgaaatttccgttggaatggcgtcctatcccgatgcccgcatcgcgcagcgttcc
tatgactaccggacccttgggcttggatttgccaatcttggcggcctgttgatgtccgcc
gccttgccctatgacagtgaccgagggcgcgccgcggccggggcgctgtctgccttgatg
accgccatcgcctacaagacctccgccgaccttgccgcacgcctcggcccttttccccgc
tttgacgccaataaagaggcagtgttgcgcgtgatgcgaaatcatcgcgccgccctcacc
ggcgatgatttcgatgatctctcggttacaccgccacgttttgacgagggcgccgttccc
tttgcgggccttgttgcggcggcgtcctcggcgtgggatgaggccatatccaaggcagaa
cgctcgggcgtccgcaatgcccaggtcaccgccatcgcccccaccggcaccatcggtctc
gtcatggattgcgacacgaccgggatcgagccggactttgctttggtcaaattcaagcaa
ttggccggcggcggcacggtgcgcctgatcaatcaatcggtcccccgcgcattggcgcga
cttggctataccgatcagcaaattcgagagatcaaggcctttgccgtcggtcacggatcg
ttagaccatgcaccaggggttagtttcgacgatctgcggcgagagggattttccgatcgg
gagattgataagctccgggcggccctcccccaggcctttgatatcagtttcgcttttacc
aaagacgttctgggggaagcgttcctgcgcggtaccctgcatctcaacgacgcacaactc
gaccaatccggctatgccttgttgagagaattgggtttctctgacgaggatattcatcgc
gccaatctcttttgctgtggcacgatgaccgtcgaaggcgcgccccatttgcagcccgag
cattacgcgatctttgactgtgcgacgcaatgcggaaggacgggaacccgcagtctcagc
gtcgccgcccatatcgacatgatggccgcgtgccagcccttcatctccggcggcatttcg
aaaacggtgaacctccctcatcgggctaccgtcgaggattgcgtcaagacctatcgcgct
gcctaccatcgtggtctcaaatcgatttctctttaccgagatggatcgaagctctcccaa
cccctcacaggggtcctgctcgccaatgacgatttgggtgaggatgatctgctcaaccaa
ccggcgggcgaaaaggcaagggtctttgccgaacgggtggtggagcgaatcgtcgaacgg
gcgccgggccgtcggcgtctgcccgatcggcgcaagggatatatccagaaagcgattgtc
ggcggacacaaggtctatctgcatacgggggaattcgaggatggcgaactcggcgagatt
ttcgtcgacatgcacaaagagggcgccgccttccgctcgctgatgaacaattttgccatc
gcgatctcccttggccttcaatacggcgtgccgcttgaagaattcgtcgatgcctatctc
ttcacccggttcgaaccggcgggtcccgtccaaggaaacgatcgcatcaaaaatgcgacc
tcgattctcgactatatcttccgagaactggcgatcagctatctcggccgcaatgacctc
ggccacgtcccggacaatgggtcggcctttgatgtcggtcgcggggtcgacgccgaaggc
gtccagcaagaagcgcagcggctgatatccaagggattttcccggtcctcaacgatggac
aatctggtggtcctgcgcggcggcgagtttgatcggttgcggcgggagcggacggaggtc
gaaggcgacggggccatcaatgacgacgagccggtgcgtccgacggagacggcagctcag
gacccggccgagcataaggggcgtctggccgaccccagtaatgcccgccaggtggcgaaa
atgaaggggtatgagggggacgcctgcggcgagtgcggacaattcaccttggtgcgcact
ggaacctgtttgagatgcgatagctgcggctattccagtggctgttcctga

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