Parvularcula bermudensis: PB2503_09564
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Entry
PB2503_09564 CDS
T01298
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pbr
Parvularcula bermudensis
Pathway
pbr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PB2503_09564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbr03021
]
PB2503_09564
03400 DNA repair and recombination proteins [BR:
pbr03400
]
PB2503_09564
Enzymes [BR:
pbr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PB2503_09564
Transcription machinery [BR:
pbr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PB2503_09564
DNA repair and recombination proteins [BR:
pbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PB2503_09564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
IDH
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ADM09965
UniProt:
E0TDE2
LinkDB
All DBs
Position
1906993..1908009
Genome browser
AA seq
338 aa
AA seq
DB search
MLEKNWQELIKPQKLEVVSSYDPQRKATIVAQPLERGFGLTLGNSLRRILMSSLQGAAVT
AIQIDGVVHEFSSIPGVREDVTIIVLNIKQLALRMHVDGPRRLTLKKQGPGIVTAGDIQE
TADIEILDKDHVICTLDEGADLRMEITVQTGKGYVPADRNRPEDAPIGLIPVDSLYSPVR
RVSYSVENTREGQVLDYDKLILEVETNGAVTPEDAAAFAARILQDQLQIFVNFDEPKRDD
QGGADEELLFNAALLRKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLATLGLHLGMDVPDWPPDNIEELARKFEDQN
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaaaagaattggcaggaactgatcaagccgcaaaagcttgaggtggtgtcgtca
tacgatccgcaacggaaggcgacgatcgtcgctcaacctctcgagcggggcttcggcctg
actctgggcaacagtctgcggcgaattctgatgtcttcccttcagggggcagcggtgacc
gcgatccagatcgatggcgttgtgcacgaattttcgtcgatccccggggttcgcgaggac
gtgacgatcatcgtgctcaatatcaaacagctggccttacggatgcatgttgacggcccc
cgtcggttgaccctcaagaaacaggggcctgggattgtgaccgccggcgacattcaagag
accgccgacatcgaaatcctcgacaaggatcacgttatctgcaccctcgatgagggcgct
gatttgcggatggaaatcacggttcagaccggtaaaggctacgtgcccgccgatcgcaac
cgacccgaggatgcgccgattgggctgatccccgtggatagcctttactcgccggtgcgc
cgggtgagctatagtgtcgagaatacccgggagggacaggtcctcgactatgacaaactc
atcctcgaagtggagacaaatggggccgtgaccccggaggatgcggcggcctttgcggcg
cgcattcttcaggatcagctccaaatcttcgtcaatttcgatgagcccaagcgcgacgat
caggggggtgccgatgaagaattgctcttcaacgccgcgcttctgcgcaaggtcgatgaa
cttgaattgtccgtccggtcggcgaactgtctgaagaacgataacatcgtctatatcggt
gacctcattcagaagaccgaagctgagatgctgcggactccgaatttcggtcggaaatcg
ctgaacgagatcaaagaagtgctcgcgaccctcggcctgcatctcggcatggatgtgccg
gattggccgccggacaatatagaagaactcgcgcgtaaattcgaagatcagaactaa
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