Parvularcula bermudensis: PB2503_11124
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Entry
PB2503_11124 CDS
T01298
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
pbr
Parvularcula bermudensis
Pathway
pbr00550
Peptidoglycan biosynthesis
pbr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PB2503_11124
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pbr01002
]
PB2503_11124
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbr01011
]
PB2503_11124
Enzymes [BR:
pbr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PB2503_11124
Peptidases and inhibitors [BR:
pbr01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
PB2503_11124
Peptidoglycan biosynthesis and degradation proteins [BR:
pbr01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
PB2503_11124
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Peptidase_S13
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
ADM10272
UniProt:
E0TIF3
LinkDB
All DBs
Position
complement(2225989..2227152)
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AA seq
387 aa
AA seq
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MSDLFLSILRLLCLASVVVGLTHGTVSAQSVTTDAPTALIMDGETGDVLFEKNARTPIPP
ASMSKLMTVAVALDMIATGELSADTPFSVSERAWRTGGSKMFVLVGTEIPLKELLKGIIT
VSGNDAAIVVAENIAGSDAAFADIMNRKAARWGLTGSHFANPHGIPDPEQRMTALDIAKL
ARHIWDSYPDYRYLFSLPEMTWSDITQRNRNPLLGLEGADGMKTGHTEEAGFGVVGSASR
DGVRRYIVVAGLPTSEARASTARRLLDTAFNDYSTVTFFTDGDRVGEAEVFGGLSETVPL
EVSTAIRMTRHVSAIRGASAKLLYESPVLAPVEEGDRLGVLQIALPGEPPQDYPIFAAER
VRERGMASKMAIGLRTLFTPPDAEAQP
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacctgttcctttctattttgcgacttctctgcctggcatcggtcgtcgtcggt
ctgacccatgggaccgtctcggcccaatcggtaacgaccgatgcaccgaccgcgctgatc
atggatggcgagaccggcgacgtcctgttcgagaagaacgcacgaacgccgatccccccc
gcctcgatgtcgaaattgatgacggtcgcggtcgccctcgacatgatcgctaccggggag
ctcagtgccgacacgcccttcagcgtttcggagcgcgcttggcgaaccgggggctcgaaa
atgttcgtcctggtgggcaccgagattcccctcaaagagctgctcaaggggatcatcact
gtgtcggggaatgacgcggcgatcgtcgtcgccgagaacattgccggcagtgatgcggcc
ttcgccgatatcatgaaccggaaagcggcgcggtggggcctgaccgggtctcattttgcc
aatccccatggcatccccgatcccgaacagcggatgacggcgctcgatatcgccaagctc
gcccgccatatttgggacagctatcccgactatcgatatctattctccctgccggaaatg
acgtggtctgatatcacgcaacgaaaccgtaatcccctccttggtctcgaaggggcggac
gggatgaagacggggcatacggaagaagccgggttcggtgtggtgggaagcgccagccgt
gacggggtccgccgatatatcgttgtggcggggttgccgacgagtgaggcgcgggccagc
accgcgcggcgcctgctcgataccgccttcaatgactacagcacggtgacctttttcacc
gacggcgatcgcgtgggcgaagctgaggtgttcggcgggctgagcgagaccgttcccctg
gaggtgagcacggcaatccggatgacccggcatgtcagcgccataaggggggcgagcgcc
aaattgctttatgaatcgccggtactggccccggtcgaggagggggaccgcctcggtgtt
ctgcaaatcgcgctgcccggcgagccgccgcaggactatccgatttttgcggccgagcgg
gtgcgggagcggggcatggcctcgaaaatggctatcggcctgcgcaccttgttcacgccg
cccgacgcggaggcgcagccatga
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