Pectobacterium brasiliense: B5S52_01910
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Entry
B5S52_01910 CDS
T06364
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pbra
Pectobacterium brasiliense
Pathway
pbra00040
Pentose and glucuronate interconversions
pbra01100
Metabolic pathways
pbra02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
B5S52_01910
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B5S52_01910
Enzymes [BR:
pbra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
B5S52_01910
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ARA74709
UniProt:
A0A433N815
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Position
complement(432910..434034)
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AA seq
374 aa
AA seq
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MKYLLPSAAAGLLLLAAQPTMAANTGGYATTDGGDVAGAVKKTARSMQDIIDIIEAAKLD
SKGKKVKGGAYPLVITYNGNEDALIKAAENDICGQWKKDARGVEIKEFTKGITIIGTNGS
SANFGIWLTKSSDVVIRNMRFGYMPGGAQDGDAIRIDNTPNVWIDHNEIFAKNFECAGTK
DGDTTFESAIDIKKASTNVTISYNYIHGIKKVGLSGFSSSDTGRDLTYHHNIYDDVNARL
PLQRGGQVHAYNNLYTGITSSGLNVRQKGIALIERNWFENAKNPVTSRYDGSNFGTWELR
NNNVMSPADFAKYNITWDKDSKPYVNAEDWKSTGTFASVPYSYSPVSAQCVKDKLANYAG
VNKNLAVLTAANCN
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacctactgccttctgcagccgctgggctgttattgcttgcggcccaaccaacg
atggcggcaaatacggggggttatgctaccactgacggtggtgacgttgccggtgccgtg
aaaaaaacggcgcgctccatgcaagacatcattgatatcatcgaagccgctaagctggat
tccaaaggtaagaaagtcaaaggtggcgcttacccgctcgtcatcacctataacggtaat
gaagacgcgctgatcaaagccgcagagaacgatatctgcggtcagtggaagaaagacgcc
cgcggtgtagaaatcaaagagttcaccaaagggattaccatcatcggaaccaatggatcg
tccgccaacttcgggatctggctgacgaaatcatccgatgtcgtcatccgtaacatgcgt
tttggttacatgccgggcggcgcgcaggatggtgatgccattcgtatcgataacacgccg
aacgtctggattgaccacaacgagatcttcgcgaaaaactttgaatgcgcaggcacaaaa
gacggtgacaccacattcgaatccgcgattgatatcaagaaagcctcaaccaacgtgacc
atttcgtacaactacattcacggcatcaaaaaagtggggctgagcggcttcagcagcagc
gatacgggccgtgacctgacttaccatcacaatatttacgacgacgttaacgctcgcctc
ccgctgcaacgtggcggtcaggttcacgcgtataacaacctgtataccggcatcaccagt
tctggcctgaacgtgcgtcagaaagggattgcgctgatcgaacgtaactggttcgagaat
gctaaaaacccagtgacctcacgttacgacggttccaacttcggtacctgggagctgcgt
aataacaacgtcatgagcccagccgacttcgcgaaatacaacatcacctgggataaagat
tccaagccctacgtgaatgcggaagactggaaaagcactggcacattcgcttctgttcct
tacagctactctccggtttcggcacagtgcgtgaaggacaaactggcgaactatgctggc
gtgaacaaaaaccttgccgtgctgacagcagcaaattgcaactaa
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