Pectobacterium brasiliense: B5S52_01915
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Entry
B5S52_01915 CDS
T06364
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pbra
Pectobacterium brasiliense
Pathway
pbra00040
Pentose and glucuronate interconversions
pbra01100
Metabolic pathways
pbra02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
B5S52_01915
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B5S52_01915
Enzymes [BR:
pbra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
B5S52_01915
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ARA74710
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Position
complement(434744..435871)
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AA seq
375 aa
AA seq
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MKYLLPTAAAGLLLLAAQPAMAANTGGYATTDGGDVSGAVKKTARSMKEIVDIIEAAQVD
SKGKKVKGGAYPLFITYNGNEDSLIKAAEKNICGQWSKDARGVQIKEFTKGITIQGTNGS
SANFGVWIVNSSNVVVRNMRFGYMPGGAQDGDAIRIDNSPNVWIDHNEIFAKNFECAGTP
DNDTTFESAVDIKKGSTNVTVSYNYIHGIKKVGLSGSSSSDTTARNLTYHHNIYRDVNSR
LPLQRGGLVHAYNNLYDGITGSGFNVRQKGKALIESNWFENALNPVTARNDSSNFGTWEL
RNNNVMSPADFAKYKITWGKPSSPHINADDWKTTGKFPTVSYKYTPVSAQCVKDKLANYA
GVGKNLAVLTAANCK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacctattgcctacggcagccgcgggattgttattactcgctgctcaacccgcg
atggccgcaaatacgggcggctatgccactacggatggtggcgacgtatccggtgccgtg
aaaaaaacggcacgttctatgaaagaaattgtggatattattgaagccgcgcaagtggat
tcaaaaggcaagaaagtcaaaggcggtgcttacccgctcttcatcacctataacggcaat
gaagattcattaatcaaagcggctgaaaagaatatctgcggccagtggagtaaggacgcc
cgcggcgtacaaatcaaagagttcaccaaaggcattactatccagggtactaatggctca
tccgccaacttcggtgtttggatcgtgaattcttctaacgtcgtggtacgtaatatgcgc
tttggctatatgccgggcggcgcgcaagacggcgatgccattcgtatcgataactcaccg
aacgtctggatcgaccacaacgagatcttcgccaagaacttcgaatgcgccggtacacca
gacaatgacaccacctttgaatcagcggttgatatcaagaaagggtcaacaaacgtcacg
gtgtcctacaactatatccacggcatcaagaaagtcggcctgagcggttcaagtagttcg
gatacgacggctcgtaacctgacttaccatcacaatatctaccgcgatgttaactcacgc
ctgccgctgcaacgtggtggtctggttcacgcgtacaacaacctgtatgacggcatcact
ggttcaggctttaacgtccgtcagaaagggaaagccctcatcgaaagcaactggttcgaa
aatgcgctgaacccagtgacggcacgtaacgacagctccaacttcggtacctgggagctg
cgtaataacaacgtcatgagcccagccgacttcgcgaaatacaaaattacctggggcaaa
ccgtcctcccctcacatcaatgcggatgactggaagaccacaggaaaattccctaccgtc
tcctataagtacactccagtttctgcgcagtgtgtgaaggataaactggcaaactatgct
ggcgtaggtaaaaacctggcagtgctgacagcagctaactgcaaataa
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