Pseudonocardia broussonetiae: HOP40_24995
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Entry
HOP40_24995 CDS
T07210
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
pbro
Pseudonocardia broussonetiae
Brite
KEGG Orthology (KO) [BR:
pbro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pbro03051
]
HOP40_24995 (pafA)
Enzymes [BR:
pbro01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
HOP40_24995 (pafA)
Proteasome [BR:
pbro03051
]
Prokaryotic proteasome
Bacterial regulatory particles
HOP40_24995 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QJY48639
UniProt:
A0A6M6JQE2
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All DBs
Position
5142162..5143523
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AA seq
453 aa
AA seq
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MQRRIYGVETEFGVTCTFHGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATAECDSLAQLVSHDKAGERILEDLLVDAERRLVDEGIGGDIYLFKNNTDSAGNSY
GCHENYLVARAGEFSRIADVLLPFLVTRQLICGAGKVLQTPRGAVYCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTTMLKVGSATLVLEMIEAGVQF
RDFTLDNPIRAIREISHDLTGRRTVRLAGGREASALDIQREYHARAVEHLAARGSEDPAM
TRVVELWGRTLDAVESQNLSLIDREIDWAIKHRLVERYRERNDLDMASARVAQLDLAYHD
IRRGRGLFDLLQRKGMVERVTDDGEIEAAKDTPPQTTRAKLRGDFIAAAQAAGRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDERVDRLIASL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggcggatctacggtgtggagaccgagttcggggtcacctgcaccttccacggc
cagcgacgtctctccccggacgaggtggcgcgctacctgttccgccgcgtcgtctcgtgg
gggcgctcgtcgaacgtcttcctgcgcaacggcgcgcggctctacctcgacgtcgggtcc
caccccgagtacgccacggccgagtgcgactcgctcgcccagctcgtcagccacgacaag
gcgggggagcggatcctcgaggacctgctcgtcgacgccgagcgccggctggtcgacgag
ggcatcggcggcgacatctacctgttcaagaacaacaccgactccgcgggcaactcctac
ggctgccacgagaactacctcgtcgcgcgggcgggggagttctcccgcatcgccgacgtc
ctgctgcccttcctcgtcacgcgccagctgatctgcggcgcgggcaaggtgctgcagacc
ccgcgcggggccgtctactgcctctcccagcgcgccgagcacatctgggagggcgtctcc
agcgccaccacccgctcgcgcccgatcatcaacacccgcgacgagccgcacgccgacgcc
gagcgctaccgccgcctgcacgtgatcgtcggcgactcgaacatgtccgagaccaccacg
atgctcaaggtcggctcggccacgctggtgctggagatgatcgaggcgggcgtccagttc
cgcgacttcaccctggacaacccgatccgggccatccgcgagatcagccacgacctcacc
gggcggcgcaccgtgcgcctggccgggggccgcgaggccagcgccctggacatccagcgc
gagtaccacgcccgggccgtcgagcacctggccgcgcgcggcagcgaggacccggccatg
acgcgcgtcgtcgagctgtggggtcgcacgctggacgccgtggagagccagaacctctcg
ctgatcgaccgcgagatcgactgggccatcaagcaccgcctcgtcgagcgctaccgcgag
cgcaacgacctcgacatggccagcgcccgcgtcgcccagctcgacctcgcctaccacgac
atccggcgcgggcgcgggctgttcgacctgctgcagcgcaaggggatggtcgagcgcgtc
accgacgacggggagatcgaggcggccaaggacaccccgccgcagaccacgcgggcgaag
ctgcgcggtgacttcatcgccgccgcgcaggccgcgggccgcgacttcaccgtcgactgg
gtgcacctcaagctcaacgaccaggcgcagcgcaccgtgctgtgcaaggacccgttccgc
agcgtcgacgagcgggtggaccgcctgatcgcgtcgctctag
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