Pendulispora brunnea: LZC95_38820
Help
Entry
LZC95_38820 CDS
T10972
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pbru Pendulispora brunnea
Pathway
pbru03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbru00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LZC95_38820 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbru03021
]
LZC95_38820 (rpoB)
03400 DNA repair and recombination proteins [BR:
pbru03400
]
LZC95_38820 (rpoB)
Enzymes [BR:
pbru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LZC95_38820 (rpoB)
Transcription machinery [BR:
pbru03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LZC95_38820 (rpoB)
DNA repair and recombination proteins [BR:
pbru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LZC95_38820 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
Imm19
Motif
Other DBs
NCBI-ProteinID:
WXA92397
UniProt:
A0ABZ2K1A5
LinkDB
All DBs
Position
complement(9911064..9915200)
Genome browser
AA seq
1378 aa
AA seq
DB search
MANAIQSNFRIRKDLGRVPRFIEVPNLIDIQKSSYDKFLQATVPQPDRIEVGLQAVFRSV
FPIKDFNGTSELVFVSYNLEKPKYDVEECRQRGMTYAAPIKVTTQLMIYDTRDGGDRIVR
DIKEQEVYFGEIPLMTDTGTFIINGSERVVVSQLHRSPGVFFDHDKGKTHSSGKLLYSAR
VIPYRGSWLDFEFDPKDIIFVRIDRRRKMHATVLLRALGYSTQDLLNYFYNTETVYLEKG
GKISKSVEYELLSGQRATRDIKVGNDVIVKKNTKYTKAAIRKLRDAKVDRLQVDVEEIVG
KVAAHDIVDKETGEVLIEVNEEVTEGKVEKLREAGVEQFRVLFIDGLNVGSYLRDTLLAE
KVKTTEDAIMEIYRRLRPGDPPTLETAKTLFNNLFFNPERYDLSKVGRLKLNYKFYRDLP
EDQRPALDTQVLTAQDILETVRHLIELKNGRGSVDDIDHLGNRRVRAVGELMENQYRIGL
VRMERAIKERMSMSQEIDTLMPHDLINAKPVSAVVKEYFGSSQLSQFMDQTNPLSEVTHK
RRLSALGPGGLTRERAGFEVRDVHITHYGRICPIETPEGPNIGLIASLSTFARVNDFGFV
ETPYRKVADGRVTDELGWYSALEEEGKYIAQASAEVDEKGRFKESLVSARLNGDFHLATP
DMVQLIDVAPNQMVSVAAALVPFLEHDDANRALMGANMQRQAVPLIRSHAPYVGTGMEGK
LARDSGVCVVAKREGIIESVDAQRIVVRAEGDKAEIPDIYHLNKFQRSNQSTCFNQKPIV
RAGERVKVGDVLADGPSCDMGELALGQNVLVAFMPWQGYNFEDSILVSERIAKDDVFTSI
HIEEFECVARDTKLGKEEVTRDIPNVGEEALKDLDESGIVRIGAEVKPGDILVGKITPKG
ETQLSPEEKLLRAIFGEKAGDVRDSSLRVPPGVGGIVINARIFSRKGTEKDERAKDIEDH
ERQRLERSRDEEIKILRDSFFRQIKRQLVGQTTNGKLVDDKGKVLLQKGAVLDEAALSEI
PQKYWGELPVEGAEELAEKLRQLEEIIQVREEHFRDKIDRLSKGDELPPGVIKMVKVYIA
IKRKLQVGDKMAGRHGNKGVISRIMAEEDMPYLQDGRPVDIVLNPLGVPSRMNVGQILET
HLGWGARVLGWQFQYMLETKFSPQAIREHILRIFEGDSQLHKWLSKLSDDEMKKVAQKLR
GGVHYASPVFDGAPERGIKDALALAGLPESGQAVLFDGRTGEAFDQEVTVGVMYMLKLHH
LVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRLGEMEVWAMEAYGTAYALQEFLTVKSDD
VMGRTRMYEAIVKGEHTLEPGLPESFNVLIKELQALCLNVELVEPGALGRTSDHAAEE
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgctatccaatccaacttccgcatccgtaaagacctcgggcgcgtcccgcgc
ttcatcgaggtgcccaacctcatcgacatccagaagtcgtcctacgacaagttcctgcag
gcgacggtgccgcagccggaccggatcgaggtgggcctccaagcggttttccgctctgtc
ttccccatcaaagacttcaacgggacgagcgagctcgtcttcgtcagctacaacctggag
aagccgaagtacgacgtcgaggagtgccgacaacgcggcatgacctacgcggcgccgatc
aaggtgaccacccagctcatgatctacgacacgcgcgacggcggcgaccgcatcgtgcgc
gacatcaaggagcaggaggtttacttcggcgagattccgctgatgacggacaccggtacc
ttcatcatcaacgggtccgagcgcgtcgtcgttagccagctccaccgtagccccggcgtc
tttttcgaccacgataagggaaagacccactccagcggcaagctgctctattccgcgcgc
gtcattccgtaccgcggttcgtggctcgatttcgagttcgacccgaaggacatcattttc
gtgcgcatcgaccgccgccggaagatgcacgcgacggtgcttctgcgcgccctcggctac
tcgacgcaggatctgctcaactacttctacaacaccgagacggtgtacctggagaagggc
ggcaagatctccaagagcgtcgaatacgagctgttgagcggccagcgcgccacgcgcgac
atcaaggtcggcaacgacgtcatcgtcaagaagaacaccaagtacaccaaggccgccatc
cgcaagctgcgcgacgccaaggtggaccgcctgcaggtcgacgtcgaagagatcgtcggc
aaggtggcggcgcacgacatcgtcgacaaggagaccggcgaagtcctcatcgaggtgaac
gaagaggtcaccgagggcaaggtcgagaagctccgcgaggcgggtgtcgagcagttccgc
gtgctcttcatcgacggtctgaacgtcggctcgtacctccgcgacacgttgctcgccgag
aaggtgaagacgacggaagacgcgatcatggagatctaccgccgcctgcgcccgggtgat
ccgcccacgctcgagacggcgaagacgctcttcaacaacctgttcttcaacccggagcgc
tacgacctctccaaggtcggccgcctcaagttgaactacaagttctaccgcgacctgccc
gaggatcagcgccccgcgctcgatacgcaggtgctcacggcccaggacatcctcgagacg
gttcgccacctcatcgagttgaagaatggccgcggctccgtcgacgacatcgaccacctc
ggcaaccgccgcgtgcgcgcggtcggtgagctcatggagaaccagtaccgcatcggtctg
gtccgcatggagcgcgccatcaaggagcgcatgtcgatgtcgcaagagatcgacacgctc
atgccgcacgacctgatcaacgccaagccggtcagcgcggtcgtgaaggagtacttcggc
tcctcgcagctgtcgcagttcatggaccagacgaacccgctgagcgaggtcacgcacaag
cgtcgtctctccgcactcggcccgggcggtctgacccgcgagcgcgcgggcttcgaggtg
cgcgacgttcacatcacgcactatggccgtatctgcccgattgaaacgccggaaggtccg
aacatcggcctcatcgcgtcgctgtcgacgttcgcccgcgtgaacgacttcggcttcgtc
gagaccccgtaccgcaaggtggccgacggccgcgtgacggacgagttgggctggtactcg
gcgctcgaggaagagggcaagtacatcgcccaggcctcggccgaggtcgacgagaagggg
cgcttcaaggagtcgctcgtctcggctcgtctcaacggtgacttccacctggccaccccg
gacatggtgcagctcatcgacgtggcgccgaaccagatggtgtcggtcgccgcggcgctg
gtgccgttcctcgagcacgacgacgcaaaccgcgcgctcatgggcgccaacatgcagcgt
caggccgtgccgctcatccgctcgcacgcgccgtacgtcggcacgggcatggagggcaag
ctggcccgtgactcgggcgtctgcgtcgttgccaagcgcgaaggcatcatcgagagcgtc
gacgcgcagcgcatcgtcgtccgcgccgaaggtgacaaggcggaaatcccggacatctac
cacctcaacaagttccagcgctcgaaccagtcgacctgcttcaaccagaagccgatcgtc
cgagccggtgagcgcgtgaaggtgggcgacgttctcgcggacggcccctcctgtgacatg
ggcgagctcgcgctcggccagaacgtgctcgtcgcgttcatgccgtggcagggctacaac
ttcgaggactcgatcctcgtgtcggagcgcatcgccaaggacgacgtgttcacctcgatc
cacatcgaggagttcgagtgcgtcgcccgcgacacgaagctcggcaaggaagaggtcacg
cgcgacattccgaacgtcggcgaggaagccctcaaggacctcgacgagtcgggcatcgtg
cgcatcggcgccgaggtgaagccgggcgacatcctcgtcggcaagatcacgccgaagggc
gagacgcagctctctcccgaagagaagctgctccgcgccatcttcggtgagaaggccggc
gacgttcgcgacagctcgctgcgcgtccccccgggcgtggggggcatcgtcatcaacgcc
cgcatcttctcgcgcaaaggcaccgagaaggacgagcgcgcgaaggacatcgaagaccac
gagcgtcagcgcctcgagcgctcgcgcgacgaggaaatcaagatcctgcgcgattcgttc
ttccgtcagatcaagcgccagctcgtcggtcagacgacgaacggcaagctggtcgacgac
aagggcaaggtccttctccagaagggcgccgtgctcgacgaggctgcgctgtccgagatc
ccgcagaagtactggggcgagctgccggtggaaggcgccgaggagctcgcggagaagctt
cgccagctggaggagatcatccaggtccgcgaagagcacttccgcgacaagatcgaccgt
ctgtcgaagggcgatgagctcccgccgggcgtcatcaagatggtgaaggtctacatcgcc
atcaagcgcaagctgcaggtcggcgacaagatggccggtcgccacggcaacaagggcgtc
atctcccgcatcatggcggaagaggacatgccgtacctgcaggacggccgccccgtcgac
atcgtgctcaacccgctcggcgttccctcgcgtatgaacgtcggccagatcctcgaaacc
cacctcgggtggggcgcgcgggtcctcggctggcagttccagtacatgctggagacgaag
ttcagcccgcaagccattcgcgagcacattcttcggatcttcgaaggcgactcccagctg
cacaagtggctgagcaagttgtccgacgacgagatgaagaaggtcgcgcagaagctccgc
ggtggtgtgcactacgcgagccccgtgttcgacggcgctccggagcgcggcatcaaggac
gcgttggccctcgcgggtctgccggagagcggccaagcggtgctcttcgacggccgcacg
ggcgaggcgttcgatcaggaggtgaccgtgggcgtgatgtacatgctcaagctgcaccac
ttggtcgacgacaagatccacgcgcgttcgatcggaccgtactcgctcgttacccagcag
ccgctgggcggcaaggcgcagttcggtggtcagcgtctcggagagatggaagtgtgggcc
atggaagcgtacggcacggcgtacgcgctccaggagttcctcacggtcaagagcgacgac
gtcatgggccgtacgcgcatgtacgaagcgatcgtcaaaggcgagcacaccctcgagccg
ggtctcccggagagcttcaacgttctcatcaaggagctccaggcattgtgcctcaacgtc
gaactcgtggagccgggtgcactcggccgcacgagcgaccacgcggcggaggagtga
DBGET
integrated database retrieval system
