Petaurus breviceps papuanus (sugar glider): 138160828
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Entry
138160828 CDS
T10505
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pbrv Petaurus breviceps papuanus (sugar glider)
Pathway
pbrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138160828 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbrv03019
]
138160828 (CNOT1)
Messenger RNA biogenesis [BR:
pbrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138160828 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
138160828 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
138160828
NCBI-ProteinID:
XP_068943710
LinkDB
All DBs
Position
Unknown
AA seq
2385 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFVKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYSEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLQNVVYGIQRGLGLEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGNAALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPPDVSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPYESKMYFFGIAALDR
FKNRLKDYPQYCQHLASISHFMRFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQAQVPAKAPLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTL
LVATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKR
VSIEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHW
LGMITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPW
TMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGSLLKDKDRLKNLEEQLSA
PKKDVKQPEALPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNP
TIPLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMR
IAAHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQREMMEQAAAQLAQD
NCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIR
LKVGGVDPKQLAVYEEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVAQIYEKCITE
LEQHLHAIPPALGMNPQSQTLRSLLDAVVMSRNSRDAIAALGLLQKAVEGLLDATSGADA
DLLLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVN
MQQYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHS
RGNAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLRE
WVNLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISY
RAQAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVV
GVLLQDHDVRQNEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKA
PGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELSKPMQIL
YKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLK
VDMLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYN
IQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIA
NQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIK
NPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7158 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcgacacggc
ccggaggcagataggcatttattacgctgcctattttctcatgtggatttcagtggcgat
ggtaaaagtagcggcaaagattttcatcagactcagtttctgattcaggagtgtgcatca
ctgattacaaagccaaattttatctcaacgctgtcctatgccattgataatccattgcac
tatcagaagagtctaaagccttcaccccacttatttgcccagctgagtaaagttctcaag
ttaagcaaggttcaagaggtcatttttggtcttgctctcttgaattcttccagctcagat
ctacgaggttttgctgcccagtttgtcaaacagaaacttccagatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatattgccatagaggtc
ctgcacctcctcctctcccatctcctttttgggcagaagggagcttttggggttggacag
gaacagatcgacgcttttcttaagacactgcgtagagattttccccaggaacgttgtcct
gtggtgcttgcaccactactttactctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggatagctaaaaccatgatggagagctctctggcagacttcatgcaa
gaagtaggctatggcttctgtgcgagtattgaagaatgtcgcaatataatcatgcagttt
ggtgttcgagaggtcacagctgctcaggttgccagggttttgggaatgatggctcggact
cattcagggttgacagatggcattccattacaatctatctcagctcctggcagtggaata
tggagtgatggaaaagataaaagtgatggagcacaggcccatacctggaatgttgaagtc
ttgattgatgttctcaaagagttgaatccaagtttgaatttcaaggaagtaacttatgaa
ttggaccaccctggatttcaaattcgtgacagcaaaggacttcagaatgtggtgtatggc
attcagagaggtctaggcctggaagtcttcccagtggatcttatttataggccttggaaa
catgcagagggccaactctccttcattcagcattcactgataaatccagagatcttctgt
tttgctgactatccctgtcacacagttgccactgatatcctcaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcctggacttgattgaatctctcttgcgactg
gcagaggtgggtcagtatgagcaggtcaaacagctcttcagctttcccatcaagcactgt
ccagatatgttggtattggccttactacagatcaacacttcttggcatacactgcgccat
gaactcatctccaccctgatgccaattttccttggaaatcaccccaactctgccattatt
ttgcactatgcctggcatgggcagggacagtctccctcgattcgccagcttatcatgcac
gccatggcagaatggtatatgcgaggggagcagtatgaccaggccaaattgtcacggatt
cttgatgtggcccaggacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgtcgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggagcccttcatccaggcgtgtatgactttttta
aagagacggtgcccttccatcttgggtggccttgccccagagaaagatcagccaaaaagt
gctcaacttcctccagaaacactggcaacgatgttggcttgtctgcaagcctgtgcaggg
agtgtttctcaagagctgtcagagactatcctgaccatggttgccaattgcagtaatgtt
atgaataaggctcgacagccaccaccaggagttatgccaaaaggacgtccccctagtgca
agcagcttagatgccatttctcctgtacagattgacccccttgctgggatggcatctctt
agtataggaggttcagctgccccccacacccagagtatgcagggttttcctccaaatttg
ggttctgctttcagtacccctcagtcaccagcaaaagcctttccacccctttccactcca
aatcagactacagctttcagtggcattggaggactctcttcacagcttccagtaggtggt
cttggcacaggtagcctgactggtataggaaatgcggctctgggactccctgcagtgaat
aatgatccatttgtgcagaggaagctgggcacctccggattgaaccagcctacattccag
cagagtaagatgaaacctccggacgtgtcccaggtgtggccagaggcaaaccagcacttt
agtaaagagattgatgatgaagcaaacagctattttcagcgcatctataaccatccaccg
catccaaccatgtctgttgatgaggtattagaaatgttacagaggtttaaggactccaat
attaaaagggaacgagaagtatttaattgtatgctgaggaacttgtttgaagaatatcgg
tttttcccccagtaccctgataaagaactgcacataacagcctgcctgtttggtgggatc
atagaaaaaggactggttacttacatggcacttggcctggccctgcgctatgttcttgaa
gccttacgcaagccttatgaatccaaaatgtatttttttgggattgctgcactagataga
tttaaaaatagattgaaggactatccccagtactgtcagcacttggcctccattagtcac
tttatgcggtttcctcatcatctgcaggagtacattgaatatggacagcaatctagagac
cctccggtgaaaatgcagggttcaattaccacccctggaagtattgcacttgcccaggcc
caggcccaggcccaggcccaggttccagcaaaagctcctcttgctggtcaagtcagcact
attgtaaccacctcaacaactactactgtggctaaaaccatcacaatcaccaggcccaca
ggagttagctttaagaaggatgtaccaccatctattaatactacaaatattgataccttg
ctggtggctacggaccaaaccgagagaattgtggagcctccagaaaatgttcaggaaaaa
attgctttcatcttcaacaatctttctcagtcaaatatgacacagaaggttgaagagctg
aaggaaacagtgaaagaggagtttatgccttgggtttcacaatatcttgtcatgaagaga
gtcagtattgagccaaacttccacagcctttattcaaattttcttgatactcttaagaat
cctgaatttaataagatggttctgaatgagacctacagaaatattaaagtgcttctgaca
tcagataaagcagctgccaacttctcagaccgctccttgctgaagaacctgggccactgg
ctggggatgatcacactagccaaaaacaaacccatcttacacacagacttagatgtaaaa
tctttactgttggaggcttatgttaaaggacagcaggagttgctatatgtggtgcccttt
gttgccaaagtcttagaatccagtgttcggagtgtggttttcagaccaccaaatccttgg
acaatggcaattatgaatgtactagctgagcttcaccaagaacatgatttaaagttaaac
ttgaagtttgagattgaggttctctgcaagaatcttgccctggacatcaatgagctaaaa
cctggcagcctcctgaaagacaaggacagactgaaaaacttagaagagcagctttctgcc
cccaaaaaggatgtcaaacagccagaggctcttcctcccatcacaaccaccactacttct
accacaccagctaccagtaccacttgtacagctactgttcctccacagcctcagtacagc
taccatgacatcaatgtttattcactgggaggtctggcaccacacattactctaaatcct
acgattccattgtttcaggctcatccacagttgaagcagtgtgtacgtcaagcaattgaa
cgtgctgtccaagagctcgtccatccagtcgtggatcggtcaattaagattgccatgact
acctgtgaacagattgtcaggaaagactttgcactggattctgaggagtcacgaatgcgg
atagcggctcatcacatgatgcggaacctaactgctggcatggctatgataacttgcagg
gaacctctgctaatgagcatagctaccaacttgaaaaacagcttcgccacagcactacga
gctgcatccccccagcagagggaaatgatggagcaggcagcggcccagctagctcaggac
aattgtgaattggcatgctgctttattcagaagactgcagtagaaaaagcaggtccagaa
atggacaagaggcttgcaactgaatttgagcttcgaaaacatgcaaggcaagaaggacga
aggtattgtgatcctgttgttttgacatatcaagctgagcggatgccagagcagatcaga
ctgaaggttggtggtgtagacccaaaacagctggctgtttatgaagagtttgcacggaat
gttcctggcttcttgcctaccaatgatttaactcaacctacaggatttttagctcagcct
atgaagcaagcttgggctactgatgatgtagcacagatctatgagaagtgtatcaccgag
ctggagcagcaccttcatgccatccctccagccttaggcatgaacccccagtctcagact
ctccgaagccttctggacgctgttgtaatgtctcgcaactcccgggacgccattgccgcc
ttgggcttgctgcagaaggctgtagagggtttgctggatgccacaagtggtgcagatgct
gacctgctgctacgttaccgggagtgtcacctccttgtattgaaagcattacaggatggc
cgtgcctatgggtctccatggtgtaacaaacaaatcacaaggtgcctgattgagtgtcgg
gatgagtataagtataatgtggaagcagtagagctgttgattcgaaatcatttagttaat
atgcagcagtatgatcttcacctggctcagtcaatggagaatggtttgaactacatggct
gtggcattcgctatgcagttggtgaagatactgttggtggatgaaaggagtgtggcccac
gtgactgaggcagatctatttcataccattgagaccctgatgaggatcaatgctcactct
cgaggaaatgcccccgaagggttgcctcagctgatggaagtggtgcggtcaaactacgag
gctatgatcgaccgtgcacatgggggccccaacttcatgatgcattcgggcatctcccag
gcctctgagtatgatgaccccccaggcctccgggagaaggcagaatacctgctgcgggag
tgggtgaacctctaccactctgcagcggctggccgagatagcaccaaagccttctctgct
tttgttggacaggtagagcttttggagagaaagatgcaccagcaaggaatcctgaaaact
gatgacctcatcacaaggttttttcgtctgtgcactgaaatgtgtgttgaaatcagctac
cgggctcaggctgagcagcagcacaatcctgctgccaaccccacgatgatccgggccaag
tgttaccataacctggatgcatttgtgcggctcatcgcattgctggtcaagcactcgggg
gaggccaccaacacagtcaccaagatcaatctgttaaacaaggttcttggtatagtagtg
ggcgtccttcttcaggatcatgatgttcgacaaaatgagtttcagcaacttccctaccac
cgaatttttatcatgctgctgttagaactaaatgctcctgaacatgtgttagaaaccatt
aatttccagacactgacagctttctgcaatacattccacatcttgaggcctactaaagcc
ccaggctttgtgtatgcctggcttgaactgatctcacatcggatatttattgcgagaatg
ctggcgcacacaccacaacagaagggctggcctatgtatgcacagctattgattgattta
ttcaagtatttagctcccttccttagaaatgtggaactcagcaaacctatgcaaatcctc
tataagggtactttacgagtgctgctggtcctcctgcatgatttcccagaatttctttgt
gactaccactatggattctgtgatgtaatcccacccaattgcatccagttaaggaatctg
atcctgagtgcctttccacgaaatatgaggctaccagacccattcactcccaacctgaag
gtggacatgttgagtgaaatcaacattgctcctcgaatcctcactaatttcactggagtg
atgcctcctcagttcaaaaaggatttggattcctatcttaaaactcgatcgccagtcact
ttcttgtctgatttgcgcagtaacctccaggtatcaaatgagcctggcaatcgctacaac
atccagctgataaacgcactggtgctctatgttggtactcaggccatcgcccacatccac
aacaaaggcagcacgccgtccatgagcaccatcactcactcggcgcacatggacatcttc
cagaacttggctgtggacctagacacagaaggtcggtacctcttcttgaatgcaattgcc
aatcagctgcggtatccaaacagccacactcactacttcagttgtaccatgctgtacctt
tttgcagaggccaacactgaagctatccaggaacagatcaccagggttctcttggaacgg
ttgattgtaaataggccacatccttggggtcttctcattactttcattgagctgattaaa
aatccggcatttaagttctggaaccacgagtttgttcactgtgccccagaaattgaaaag
ttgttccagtcagtcgcacagtgctgcatgggacagaagcaggctcagcaagtgatggag
ggcactggtgccagttag
DBGET
integrated database retrieval system
