Pseudomonas bubulae: V6B39_01875
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Entry
V6B39_01875 CDS
T10711
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pbub Pseudomonas bubulae
Pathway
pbub02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
V6B39_01875 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbub02000
]
V6B39_01875 (msbA)
Enzymes [BR:
pbub01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
V6B39_01875 (msbA)
Transporters [BR:
pbub02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
V6B39_01875 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
RsgA_GTPase
AAA_29
nSTAND3
DEAD
AAA_30
NB-ARC
MMR_HSR1
nSTAND1
AAA_18
DUF815
Motif
Other DBs
NCBI-ProteinID:
WWR38210
LinkDB
All DBs
Position
complement(452014..453822)
Genome browser
AA seq
602 aa
AA seq
DB search
MTESSPSTSESSLKIYLRLLSYVRPYVGLFLLSIVGFLIFASTQPMLGYILKYFVDGLSN
PDAVLFPSVPYLRDLRLLQVVPILIVLIAAWQGLGSFLGNYFLAKVSLGLVHDLRVQLFN
NLLVLPNRYFDKHNSGHLISRITFNVTMVTGAATDAIKVVIREGMTVVFLFGSLLWMNWR
LTLVMVAILPLIAVMVSTASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEAYE
RKRFLQASQSNTDKQLRMTRTGAIYTPMLQLVIYVAMGILMFLVLYLRGDSSPGDMIAYI
TLAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDEKPEVDTGTVERDHVTGRLEVRNLS
FTYPDTDRQVLRDVSFSAEPGQMVALVGRSGSGKSTLANLIPRFYHHTAGEILLDGVEIE
DYRLLNLRRHIAQVTQHVTLFSDTVANNIAYGDLAGAPRADIEKAARDAYAMDFIEQLPQ
GLDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDHVMK
GRTTLVIAHRLTTIEKADLILVMDQGQIVERGTHAELMAQNGYYARLHSMGLDAPEVSGD
IA
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaatccagccccagcacaagcgaatcgagcttgaagatatatctgcgcctgctc
agctatgtccggccttatgtcggcctgttcctgctgagtatcgtcgggtttcttattttc
gcttcgacccagccaatgcttggttacatcctcaagtatttcgtcgatggcctgtccaat
ccggacgcagtgctgtttccttccgttccctatttgcgtgatctgcgcctgttgcaggtc
gtgccgatcctgattgtgttgatcgccgcatggcagggcctggggtccttcctgggcaac
tacttcctggccaaggtctccctgggcctggtacacgacttgcgggttcagctgttcaac
aacctgctggtcttgcccaaccgctatttcgacaagcacaactcgggccatctgatctcc
cgtattaccttcaacgtgaccatggtcaccggtgctgccaccgatgcgatcaaggtggtg
atccgtgaaggcatgacagtcgtgttcctgtttggctcgttgctgtggatgaactggcgc
ctgacgctggttatggtcgcgatcttgccactgattgcggtcatggtgagcacagccagc
aaaaaattccgcaagcaaagcaagaagattcaggttgcgatgggtgacgtaacccacgtt
gcctcggaaaccatccagggctaccgcgttgtgcgcagctttggcggtgaggcgtatgag
cgcaagcgcttcctgcaggcgagccagagcaacaccgacaagcaactgcgcatgacccgc
accggggctatctataccccgatgctgcaactggtcatctatgtagctatgggcatcctg
atgttcctggtgctttaccttcgtggtgactcgtcgcctggcgacatgatcgcctacatc
accctggccggcctgttacccaagccgattcgtcagctgtctgaagtcagctcgacgatc
cagaagggtgtagcgggtgccgaaagcatctttgaacagctggatgagaaaccggaggtc
gataccggcactgttgagcgcgaccacgtcactggccgtctggaagtgcgcaatctgagc
ttcacctacccggacaccgaccgtcaggtgctcagggacgtgagcttttcggccgaaccg
gggcaaatggtggcattggtggggcgttccggcagtggcaagtcgacattggcgaacctg
attccgcgtttctatcaccacacagcgggcgaaattctgctcgatggtgttgaaatcgaa
gattaccgtctgctcaacctgcgccgtcatattgcccaggtaacccagcatgtgaccctg
ttcagcgataccgtggccaacaatattgcctacggtgacctggcgggtgccccgcgtgcc
gacatcgaaaaagccgcgcgtgatgcttacgcgatggactttatcgagcaattgccacaa
ggcctggacacccaggtcggtgagaacggcgtgctgctttccggcggtcagcgtcagcgt
ctggcaattgcccgggcgttactcaaaaacgcaccgctgctgatcctggatgaggccacc
tcggcgctggataccgagtccgagcgccatatccaggcggcactcgaccacgtcatgaaa
ggtcgcaccacgctggtgatcgctcaccggctgaccaccatcgagaaagccgatctgatt
ctggtgatggatcagggccagattgtcgagcgcggtacccatgccgagctgatggcgcaa
aacggttactacgcacgcttgcactcgatggggcttgatgcgcctgaggtctccggcgat
atcgcctga
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