Pseudomonas bubulae: V6B39_22285
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Entry
V6B39_22285 CDS
T10711
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pbub Pseudomonas bubulae
Pathway
pbub02024
Quorum sensing
pbub03060
Protein export
pbub03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
V6B39_22285 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
V6B39_22285 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
V6B39_22285 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pbub02044
]
V6B39_22285 (ffh)
Enzymes [BR:
pbub01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
V6B39_22285 (ffh)
Secretion system [BR:
pbub02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
V6B39_22285 (ffh)
Eukaryotic Sec-SRP protein
V6B39_22285 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
APS_kinase
cobW
AAA_33
YqeC
nSTAND3
AAA_16
KTI12
AAA_31
ParA
6PF2K
Thymidylate_kin
ABC_tran
AAA_5
DnaB_C
AAA_28
AAA_17
AAA_24
AAA_18
AAA_30
NACHT
TsaE
ResIII
ArsA_ATPase
DUF3731
Motif
Other DBs
NCBI-ProteinID:
WWR37651
UniProt:
A0ABZ2H4W3
LinkDB
All DBs
Position
complement(4903626..4905002)
Genome browser
AA seq
458 aa
AA seq
DB search
MFENLTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVAAVKERAV
GTEVSRSLTPGQAFVKIVQAELESLMGAANEDLVLNVTPPAVVLMAGLQGAGKTTTAGKL
ARFLKERKKKTVMVVSADVYRPAAIKQLETLANEVGVTFFPSDLSQKPVDIARAAIAEAK
LKFIDVVILDTAGRLHIDAEMMTEIQELHAAVKPAETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRAITGKPIKFIGMGEKSDALEPFHPDRIASRILGMGDV
LSLIEQAEQTLDKDKADKLAKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPNMGGV
NLAQMGNAQGAAEKQFKQMEAIINSMTPAERRDPELISGSRKRRIAMGSGTQVQDIGRLI
KQHKQMQKMMKKFSTKGGMAKMMRGMGSMMPGGGMPKM
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaatttaaccgaccgtctttcgcagacgctgcgccatgtcaccggcaaggcc
aagctgaccgaagacaatatcaaagacaccctgcgtgaagtacgcatggcgttgctggaa
gccgacgtggctttgccagtggtcaaagacttcgtcgctgcggtcaaagagcgcgctgtc
ggcactgaagtgtcgcgcagcctgacgccgggccaggcgtttgtaaaaattgttcaggct
gaacttgaaagcctgatgggcgctgccaacgaggacctggtccttaatgtcacgccgcca
gccgttgtattgatggccggtttgcagggcgctggtaaaaccacgactgccggcaagctg
gcgcgcttccttaaagagcgcaaaaagaaaactgtgatggtggtctcggccgacgtttat
cgtccggctgcgatcaaacagctcgaaaccctggccaatgaagtcggtgtaaccttcttc
ccgtccgaccttagccagaagccggtagacatcgctcgcgccgccattgcggaagccaag
ctgaagttcatcgacgtggtcatcctcgataccgcaggtcgcctgcatatcgatgccgag
atgatgaccgagatccaggagctgcacgcggccgtcaagccggcagaaaccctgtttgtc
gtcgacgccatgactggccaggatgcggccaacaccgccaaggcgttcggtgatgcattg
ccgctgaccggggtgatcctgaccaaggtcgacggtgatgcccggggtggtgcggcgttg
tccgtgcgagccattaccggcaagccgatcaagttcatcggtatgggtgagaagagcgat
gcgctcgagccgttccacccggatcgtatcgcttcgcgcatcctcggcatgggcgacgtg
ctcagcctgatcgagcaggccgaacagaccctcgataaagacaaagccgacaaactggct
aaaaagcttaaaaaaggcaaaggcttcgatctcgaagacttccgtgaccagctgcaacag
atgaagaacatgggtggccttggcggcctcatggacaaactgccgaacatgggtggtgtc
aatctggcgcaaatgggcaatgcccagggcgcagctgagaaacagttcaagcagatggaa
gccatcatcaactccatgaccccggccgagcgccgcgaccctgagctgatcagcggttcg
cgcaaacgccggattgccatgggctccggcactcaggtgcaggacatcggccgcttgatc
aagcagcacaagcagatgcaaaagatgatgaaaaaattctccaccaaaggtgggatggcg
aaaatgatgcgcggcatgggctcgatgatgcccggcggcggcatgccaaaaatgtaa
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