Paenibacillus bovis: AR543_21985
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Entry
AR543_21985 CDS
T04407
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pbv
Paenibacillus bovis
Pathway
pbv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AR543_21985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbv03021
]
AR543_21985
03400 DNA repair and recombination proteins [BR:
pbv03400
]
AR543_21985
Enzymes [BR:
pbv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AR543_21985
Transcription machinery [BR:
pbv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AR543_21985
DNA repair and recombination proteins [BR:
pbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AR543_21985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ANF98392
UniProt:
A0A172ZLW1
LinkDB
All DBs
Position
complement(5142900..5146514)
Genome browser
AA seq
1204 aa
AA seq
DB search
MIDVNNFEFMKIGLASPDKIRSWSRGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLALDM
SPRSLEEVIYFASYVVTDPGETPLEKKQLLSEKEYRSYREKYGYGFHAGMGAEAIKRLLQ
DLDLDKELEFLREELRTAQGQRRNRAIKRLEVIEAFRNSGNSPDWMIMDVLPVIPPEIRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPYLKMYQCGLPKE
MALELFKPFVMKELVNKGLAHNIKSAKRKVERVSPEVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPILVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLASGNIL
NPKDGKPVVTPSQDMVLGSYYLTMDNMEAKGSGMILRTVNEAVSAYQRGTASLHARVAIP
AKALGKTSFTEKQQSGMLITTVGRIIFNEIFPESFPYINEPTRANLYQGIPDHYFIYEKG
TNVLEFMKAVPQTGAIGKEYLGTIIARCFEVYHTTLTSVILDKIKQLGFTYSTRAGITVG
VADVVVPPEKTALLAESDKKVAVITNQYRRGLITNEERYDRVIEIWSRTKDELTDILMKS
MDRYNSIMLMVDSKARGNKSQITQLGGMRGLMANPSGRIIELPIKSNFREGLTVLEYFLS
THGARKGLADTALRTADSGYLTRRLVDVAQDVIVREDDCGTDKGFIVSRIQDGKEVIEDL
YDRLEGRYCFETVRHPETGEILASRNELIDSDKAEAIVAAGVNKVQIRSVLSCRTRHGVC
KKCYGRNLATGKHVEIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEL
FEARNPKGQATISEIDGVVKEIREAKDRREIEVEGEAETKVYSVTYGSRLRVREGMEIEA
GDELTDGSIDPKEMLRIKGIRGVQNYILQEVQRVYRNQGVEINDKHVEVMIRQMLRKIRI
VDNGETTLLPGSFVDIYEYEDANKVAIMGDREPAVAKPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKVDKLLGLKENVIIGKLIPAGTGMNRYRSVQFEEPEAVEGNEENLET
VTVE
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
ttgatagacgttaacaatttcgaatttatgaaaattgggcttgcttccccagacaaaatt
cgttcttggtcccgcggagaagttaaaaaaccggagacaatcaactaccgtacgcttaaa
ccagagaaagacggtctgttctgtgaacgcattttcggaccaaccaaagactgggaatgt
cattgcggtaaatataagcgcgtacgttacaaaggtgtagtctgtgaccgttgtggcgtt
gaagtaacacgtgccaaagtacgtcgtgaacgtatgggacatattgagctggcagctcct
gtatcccacatttggtatttcaaaggtatcccgagccgtatgggtcttgcactcgatatg
tctccacgatccctggaagaagttatctacttcgcatcttatgttgttaccgatccaggc
gagacaccattggagaagaaacaacttctctctgaaaaagaataccgcagctaccgtgaa
aagtatggctacggattccatgcaggtatgggtgcagaagcgatcaagcgactgcttcaa
gacctggatctggacaaagaactggaattcctgcgtgaagagctgcgtaccgctcaaggc
caacgtcgtaaccgtgcgatcaaacgtcttgaagttatcgaagcattccgcaattccggc
aactctccggattggatgatcatggatgttctgccggtaattccgccagaaattcgtccg
atggttcagctggatggtggacgttttgcaacatccgacctgaatgacctgtaccgtcgt
gtaatcaaccggaataaccgtctgaagcgcctgctggatctgggtgctcctgatattatc
gtacagaacgagaaacgtatgctgcaggaagctgtagatgccttgatcgataacggccgt
cgcggacgtccggtaaccggtcctggtaaccgtcctctgaaatccctcagccatatgctg
aaaggtaaacaaggtcgtttccgtcagaacttgctcggtaaacgtgtcgattactctggt
cgttccgttatcgtcgtaggtccttacctgaaaatgtaccagtgcggtcttccaaaagaa
atggcgctggaactgttcaagccattcgtaatgaaagagctggttaacaaaggcctggct
cataacattaagagtgcaaaacgcaaagttgaacgtgtaagtccggaagtatgggatgta
ctggaagaagtaatcaaagaacacccggttcttctgaaccgtgcaccaacgctgcacaga
ctcggtatccaggcatttgaaccgattctggttgaaggccgcgcaatccgtctgcatccg
ctcgtatgtacagcatataacgctgactttgacggtgaccaaatggcggttcacgtaccg
ttgtctgcagaagcacaagcggaagcacgcttgctgatgctggcatccggtaacatcttg
aaccctaaagacggcaagccggttgttacaccttcccaggatatggtcctcggctcctac
tatctcaccatggataatatggaagccaaaggttccggcatgatcctgcgtacagtcaat
gaagccgtatccgcttatcagcgtggcacagcttccctgcatgcacgtgtagcgattcct
gccaaagcactgggtaaaaccagctttacggaaaaacaacaatccggtatgttgatcaca
actgtcggacggattatctttaacgagattttccctgagtctttcccttatatcaatgaa
ccgactcgtgccaacctgtatcagggtatcccggatcactactttatctatgaaaaaggt
acaaacgtactcgaattcatgaaggccgttccgcaaaccggtgcgatcggtaaagaatat
cttggtactatcattgcacgttgtttcgaagtctaccatacaacactgacttccgtaatt
ctggataaaatcaagcaactgggcttcacgtattccactcgtgcgggtattaccgttggt
gtggcagacgttgtggttccaccggagaaaacagcactgctggctgaatccgataaaaaa
gttgccgttatcacgaatcagtaccgtcgtggtctgatcacaaacgaagagcgttatgac
cgtgttatcgagatctggtcccgtacgaaggacgagctgaccgacatcctgatgaaatcg
atggatcgttacaactccatcatgctgatggttgattccaaggcgcggggtaacaaatcc
cagattactcagctgggcggtatgcgtggtctgatggccaacccatccggtcgtatcatc
gagctcccaatcaaatcgaacttccgtgaaggtctgacagtccttgagtacttcctgtct
actcacggagcgcgtaaaggtctggcggatacagcacttcgtaccgctgactccggttat
ctgactcgtcgtctcgttgacgtagcccaggacgtaatcgtacgtgaagatgattgcgga
acagacaaaggatttatcgttagccgtatccaggatggtaaagaagttatcgaagacctg
tacgatcgtctggaaggacgctactgcttcgagactgttcgtcatccggagactggcgag
atcctcgctagccgcaatgaactgattgattctgacaaggctgaagctatcgtggctgct
ggcgtcaacaaagtacagattcgttccgtactgagctgccgtacaagacacggggtatgt
aagaaatgttacggtcgtaacctggcgactggtaaacacgttgagatcggtgaagcggtt
ggtattatcgctgcccagtccatcggtgagccaggaacccagttgacaatgcgtacgttc
cataccggtggtgtagccggagatgatatcactcaaggtttgccgcgtatccaggagctg
tttgaagcccgtaaccctaaaggtcaggcgacaatcagtgaaatcgatggcgtagtcaaa
gaaatccgtgaagccaaagaccgtcgcgaaatcgaagtcgaaggtgaagcagaaactaaa
gtctactccgttacctacggttcccgcctgcgtgtaagagaaggcatggagatcgaagca
ggggacgagctgacagacggttccatcgatccaaaagaaatgctgcgtatcaaaggtatc
cgcggcgttcagaactacatcctgcaggaagtacaacgcgtataccgtaaccagggtgta
gaaattaacgataagcacgttgaagttatgatcagacagatgctgcgcaaaatccgtatt
gtggataacggcgaaactacgctgctgccaggctcatttgtggatatctacgaatatgaa
gatgccaacaaagtggccattatgggagaccgtgaaccagctgttgccaaaccggtattg
ctcggtattaccaaagcatccctggaaactgattccttcctgtctgctgcatctttccaa
gagaccactcgtgtcctgaccgatgctgcaatcaaaggtaaagtcgacaaattgctgggt
ctgaaagagaacgttattatcggtaagctgatccctgcaggtacgggtatgaaccgttac
cgcagtgttcagttcgaagaaccggaagcagtagaaggaaacgaagagaatctggaaact
gtaactgtagaatag
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