Pseudoalteromonas sp. Bsw20308: D172_000210
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Entry
D172_000210 CDS
T04175
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbw03016
]
D172_000210 (gidA)
03036 Chromosome and associated proteins [BR:
pbw03036
]
D172_000210 (gidA)
Transfer RNA biogenesis [BR:
pbw03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
D172_000210 (gidA)
Prokaryotic type
D172_000210 (gidA)
Chromosome and associated proteins [BR:
pbw03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
D172_000210 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
SAM_GIDA_C
FAD_oxidored
FAD_binding_2
Thi4
Pyr_redox_2
AlaDh_PNT_C
DAO
Pyr_redox
HI0933_like
MarR_2
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
ALQ06607
LinkDB
All DBs
Position
46980..48869
Genome browser
AA seq
629 aa
AA seq
DB search
MIFHENFDVIVVGGGHAGTEAALAAARMGMNTLLLTHNMDTLGQMSCNPAIGGIGKGHLV
KEIDALGGAMAQAIDKGGIQFRTLNSSKGPAVRATRAQADRALYKAAIQTTLQNQDNLKI
FQQSCDDLIVENDRVTGVVTQMGLRFSAPSVVLTVGTFLGGLIHIGLENYKGGRAGDPPS
IALADRLREHPFRVDRLKTGTPPRIDARTVDFTKMEAQPGDTPTPVFSFMGKQSDHPQQI
PCYITYTNEKTHDVIRKNLHRSPMYSGVIEGIGPRYCPSIEDKIVRFADKDKHQIFVEPE
GLTSYELYPNGISTSLPFDVQLEIVQSISGFENAHICRPGYAIEYDYFDPRDLKQSLETK
FIEGLFFAGQINGTTGYEEAGAQGLIAGMNAALKVQGKDSWTPRRDEAYVGVLIDDLATL
GTKEPYRMFTSRAEYRLLLREDNADIRLTEKGRELGLVNDERWQAFNEKMEVIEKEKQRI
KDTWIHKDHAVVDQVNALLKTPLTREASLEELLRRPEIRYNDLMAIDGLGSEFTNKAALE
QVEIHTKYAGYIARQQDEINKQLRHEQTILPKEFDYKTVSGLSNEVVAKLIESRPDTIGQ
ASRISGITPAAISLLLVYLKKQGLLRKSA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgatttttcacgaaaattttgacgttatcgtagtaggtggtggacatgctggcactgaa
gccgcattagcagctgcccgtatggggatgaataccctgctactgactcacaatatggat
acccttggtcaaatgtcttgtaacccagcaattggtgggataggcaaaggtcatttggta
aaagaaattgacgcgcttggtggtgcaatggcacaggccattgataaaggcgggatccaa
tttcgtacactaaattcttcaaaaggacctgctgttcgtgcaactcgagcacaagcagat
cgcgccttgtacaaagcggctattcaaacaacattgcaaaatcaagataatcttaaaatt
tttcaacaatcgtgtgatgatcttattgttgaaaacgatcgtgttactggcgtagtaact
caaatgggtttgcgttttagtgcaccaagtgttgttttaaccgtgggtacttttttaggt
ggcttaatccatatagggttggaaaattacaaaggcggccgtgcaggcgatcctccttca
atcgctttagctgatcgcttacgtgaacatccatttagagttgatcgtttaaaaacaggt
acaccgccacgtattgatgcacgtactgttgattttacaaaaatggaagcacaacctggt
gatacaccaacacctgtgttttcatttatgggtaaacaatcagatcacccacaacagata
ccgtgttacatcacttacacaaacgaaaaaacacatgatgttattcgtaaaaacctacat
cgctcacctatgtactcaggtgttattgaaggtattggtcctcgctactgcccttcaatt
gaagataaaattgttcgttttgcagataaagataaacatcaaatatttgttgagcctgaa
ggtttaacatcatacgaattatatccaaatggtatttcgactagtttaccgtttgatgta
caacttgagattgtgcaatctatttctggttttgaaaatgcacatatttgtcgaccaggt
tatgcaatagaatatgactactttgatccacgtgatttaaaacagtctttagaaactaaa
tttattgaaggcttatttttcgcgggtcaaattaacggtactaccggctatgaagaagca
ggtgcacaaggcttaattgcaggtatgaatgctgcgctaaaagtgcaaggcaaagattct
tggacaccacgtcgtgatgaagcttatgttggtgtattaatcgacgacttagcaacactg
ggtacaaaagaaccctaccgtatgtttaccagccgtgctgaatatcgtttattacttcgt
gaagataatgctgatattcgtttaacagaaaaaggccgtgagcttggtttagttaatgac
gaacgctggcaggcatttaacgaaaaaatggaagtaatcgaaaaagagaaacaacgcatt
aaagatacatggatccacaaagatcatgccgttgtagatcaagtaaacgcattacttaaa
accccgcttacgcgtgaagcaagcttggaagaattacttcgccgtccggaaattcgttac
aacgatctgatggctattgacggattgggatctgaattcacaaataaagcagcactcgag
caagttgagatccatactaagtacgcaggttatattgcgcgccaacaagatgaaatcaat
aagcagcttcgtcatgagcaaacaattttaccaaaagagtttgattacaaaaccgtatct
ggtttatcaaatgaggtagttgctaagcttattgagtcacgtcctgacacgattggtcaa
gcatcgcgtatttctggtatcacccctgcggcgatttcgctattattggtgtatctgaag
aagcaaggcttattacgcaaatctgcgtaa
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