Pieris brassicae (large cabbage white): 123711072
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Entry
123711072 CDS
T08632
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pbx
Pieris brassicae (large cabbage white)
Pathway
pbx03440
Homologous recombination
pbx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123711072
03460 Fanconi anemia pathway
123711072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbx03032
]
123711072
03400 DNA repair and recombination proteins [BR:
pbx03400
]
123711072
Enzymes [BR:
pbx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
123711072
DNA replication proteins [BR:
pbx03032
]
Eukaryotic type
DNA Topoisomerases
123711072
DNA repair and recombination proteins [BR:
pbx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
123711072
FA (Fanconi anemia) pathway
123711072
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
DUF5795
Motif
Other DBs
NCBI-GeneID:
123711072
NCBI-ProteinID:
XP_045519435
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Position
1:13930312..13941330
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AA seq
849 aa
AA seq
DB search
MKTALMVAEKPSLAQSLANILSNGKCITNKGSNTACSVHEWSGLFKNESVKFKMTSVCGH
VMSLDFTGKFNNWDKVDPIELFNCPTEKKEAMPRLRMPAFLAQEGRGCDYLILWLDCDKE
GENICFEVMTCVAPYMKGDVYSPLVTYRAKFSAITDKDIKAAMLNLVRPNENESRSVDAR
QELDLRIGCAFTRFQTKYFQGRYGDLDSSLISYGPCQTPTLGFCVQRHDDIQTFKPESYW
VLRVTASTTEGRELPLEWKRVRVFEKDIANMFLASIKEIKEALVVNIQAKEKIKARPVAL
NTVELMRVASAGLGIGPHNAMQVAERLYTQGYISYPRTETTSYPENFDLMGALRLQQNSN
KWGADVRALIANGINKPKKGKDVGDHPPITPMKLASDSELDGDMWRIYDYVTRHFIATLS
RDCRFLSTVITFEVGTETFSYTGNTLVDPGYTEIMHWQAFGKDEFVPTLNVGDELRAHEH
RLVECQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVNVGSGRRLVPTSLG
VVLVHGYQKIDPQLVLPTMRSAVEEQLNLIAVGRADFHAVLSHTTEIFRRKFQYFVRSME
SMDQLFEVSFSSLKTSGKALSRCGKCRRYMRYIQAKPIRLHCSHCDDTYTLPQTGSVRIY
RELKCPLDEFELLSWSSGSKGKSFPLCPYCYNHPPFRDMKKGFGCNSCTHPTCSYGVNST
GVSGCIDCDGVLVLDPSSPRWKLTCNRCDVIINVFDDASRVTVSDQQCPDCGAQQVTVEY
RPERTKLPAALTEMTACLYCEPTFTALVEKHRAVTQRGGGARGRGRQRNNKHRNKQPKDK
MAQLAAYFV
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgccttaatggtggcagaaaagccatctttagctcagagtttggccaatata
cttagcaatggaaaatgcatcaccaataaaggttccaatacagcttgttctgttcatgaa
tggagcggtttatttaaaaatgaatcggtaaaattcaagatgacatctgtgtgtgggcat
gtaatgagtttagattttactgggaaatttaataattgggacaaagtcgaccccattgag
ctgtttaactgccctactgaaaagaaggaggcaatgccaagactccgcatgcctgccttt
ctagcgcaggaaggcaggggatgtgattatcttatactgtggttggattgtgacaaagaa
ggagaaaacatatgttttgaggtgatgacttgtgttgctccctatatgaaaggtgatgtt
tattcacctctagtgacatatcgtgcaaaattctctgctattactgataaagacataaaa
gcagcaatgttaaatcttgttagaccaaatgaaaatgaatcaagaagtgttgatgctaga
caggaattggatttgagaattggctgcgcctttacaaggtttcaaactaaatatttccaa
ggccgttatggtgatttggattcgtcccttatttcctatggtccatgtcagacaccaacc
cttggattctgtgttcagcgtcacgatgatattcagacctttaaaccagagtcatactgg
gttttacgagtgacagcttctacaactgagggtcgagaactcccattagagtggaagaga
gtacgtgtttttgaaaaggatattgctaatatgttcctggcaagcattaaagagataaaa
gaagctttagttgtgaatatccaagcaaaagagaaaataaaagctcggccagtggctcta
aacactgtggagctgatgagagtggccagtgccggattgggtattggaccacataatgct
atgcaggtggcagagcgtctttacacacaaggttatatctcatatccccgtactgagacg
acaagctatccggaaaactttgatttaatgggtgctctccgcctgcaacagaattcaaac
aagtggggggcggacgtacgagcgttgatagcgaatggtatcaacaaacccaagaaaggg
aaagatgttggagaccatcctccgatcacaccaatgaaactggcttctgactcggagtta
gacggcgatatgtggcgtatatacgactacgtgacgcgacactttatagcgactttatcg
cgcgactgtcgtttcttgtccacggttatcaccttcgaagtgggaacggagacattttcg
tacacgggcaacactttggtcgatccgggatacacggagattatgcattggcaggcgttc
ggtaaagatgaattcgtgcctaccctcaatgtgggagatgagttacgtgcccacgaacac
agattggtcgaatgccagacttcaccgccggactatctgactgaagctgagttaatcaca
ttaatggaaaaacacggtattggaacggacgcatcaatcccggtacatataaataatatt
tgccaaaggaattacgtcaatgtgggcagtggacggcgattggtcccaactagtttgggc
gtggttttggtgcatggctatcagaagattgacccacaactcgttctaccaactatgcgt
tccgcggtcgaagaacagctaaacctcattgccgtcggacgagcggatttccacgccgta
ctttcccatacgactgagatatttagaaggaaattccagtatttcgtgagaagtatggaa
tctatggaccagctgttcgaagtcagcttctcctcgttgaaaactagtggaaaggcgctg
tcgagatgcggcaaatgtcgccgttatatgagatatattcaggccaaaccaatccgtctt
cattgttcgcactgcgacgacacgtatacgttgcctcaaacgggcagtgtacgtatttac
cgcgagctcaaatgtcccttggatgagttcgagttgctctcgtggtcttcgggctcgaag
ggcaagagcttcccgctttgcccctactgctataaccatccgccatttagggacatgaag
aaaggctttggctgcaactcgtgtacgcacccaacgtgctcgtacggcgtcaactccacg
ggcgtgtccggatgtatcgattgtgatggagttcttgtcctggacccgtcttcgccgaga
tggaagctcacttgtaaccgatgcgacgtaataataaacgtgttcgacgacgcgtcgcgc
gtgaccgtgagcgaccagcaatgcccggattgtggggctcaacaggtcacggtggaatat
cggcccgagaggacaaaactgccagcagctctcaccgagatgacggcctgcctttactgc
gaacccactttcactgcattggtggaaaagcatcgcgcagtgacacagcgagggggcggg
gcacgtgggcgtggccgacaacgtaacaataaacatcggaacaaacagcccaaggacaag
atggcgcaactcgccgcttacttcgtttga
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