Pseudomonas cannabina pv. alisalensis: JGS08_19410
Help
Entry
JGS08_19410 CDS
T07379
Symbol
rlmF
Name
(GenBank) 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcab03009
]
JGS08_19410 (rlmF)
Enzymes [BR:
pcab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
JGS08_19410 (rlmF)
Ribosome biogenesis [BR:
pcab03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JGS08_19410 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
Methyltransf_12
PrmA
UPF0020
Motif
Other DBs
NCBI-ProteinID:
QQN20760
LinkDB
All DBs
Position
4344105..4345091
Genome browser
AA seq
328 aa
AA seq
DB search
MTDTPKPPRKKPQRPAKPAAPREKATLHPRNRHQGHYDFPKLIKSSPELAAFVILNPYGK
ESIDFANPQAVRVFNRALLKAFYGIAHWDIPADYLCPPIPGRADYLHFLADLLAEDNEGV
IPRGPSVKALDIGTGANCIYPLLGHSDYGWQFVGSDIDTTAVAAATTIVKANGLQKAVSV
RLQGNRKQILLGLLDSSERFHVSLCNPPFHASLDEAQRGSQRKWRALGKADPKRKLPVLN
FGGQSQELWCEGGEIGFVTQLIQESAKLPDQVVWFSTLVSKATNLPPIQSALKKAGALEV
KIVEMGQGQKQSRFVAWTFLDKAQRITG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccccgaaacctccgcgcaagaagcctcaacggccggcaaaaccagccgcg
ccgcgtgagaaagccaccttgcacccgcgcaatcgtcatcaggggcactacgattttccg
aagctgatcaagtccagtcctgaactggccgcattcgtgattctcaatccctatggcaag
gaaagcatcgacttcgccaacccgcaggcggtgcgggtgttcaatcgcgcgctgctcaag
gcgttctatggcatcgcgcactgggacattccggccgactatctgtgcccgcctattccg
gggcgtgcggattacctgcacttccttgccgacctgctcgctgaagacaacgaaggcgtg
atcccgcgtgggccgtcggtcaaggcactggatatcggcaccggcgccaactgcatctac
ccgctgctggggcacagcgattatggctggcagttcgtgggttcagacatcgacactacg
gccgtcgcagcagcgaccaccatcgtcaaagcgaacggtttgcaaaaggccgtcagcgtg
cgcttgcagggcaatcgcaaacagatcctgctcgggctcctcgacagcagcgaacgcttc
cacgtgagcctctgcaacccgcccttccatgcttcgctggacgaagcgcaacgcggtagc
cagcgcaaatggcgcgcactgggcaaggccgatcccaagcgcaaactgccagtgctcaac
tttggcgggcagtctcaggaattgtggtgcgaaggcggcgagatcggtttcgtgacgcaa
ctgatccaggaaagcgccaaattacctgatcaggtggtgtggttcagtaccctggtgtcc
aaagcaaccaacctgcccccgatccagagcgccctgaaaaaagctggcgcgcttgaagtg
aagatagtggaaatgggccaaggccagaaacaaagccgcttcgtggcctggaccttcctc
gataaggcacagcgcataaccggctga
DBGET
integrated database retrieval system
