Pectobacterium cacticida: OI450_13310
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Entry
OI450_13310 CDS
T08693
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pcac
Pectobacterium cacticida
Pathway
pcac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OI450_13310 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcac03400
]
OI450_13310 (ung)
Enzymes [BR:
pcac01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
OI450_13310 (ung)
DNA repair and recombination proteins [BR:
pcac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OI450_13310 (ung)
Prokaryotic type
OI450_13310 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UYX08698
LinkDB
All DBs
Position
2900471..2901157
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AA seq
228 aa
AA seq
DB search
MATSLTWHDVLAQEKLQPYFINTLEFIKKERAAGKIIYPPQKDVFNAFRFTELHQVKVVI
LGQDPYHGPNQAHGLSFSVRPGVPAPPSLVNIYKELASDIPGFEIPRHGFLQSWAEQGVL
LLNTVLTVEAGRAHSHANLGWETFTDRVIAALNEQREGLVFLLWGSHAQKKGSIIDQRRH
HVLKSPHPSPLSAHRGFFGCKHFSQANQFLEQQGLSPIDWTPKLQENA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttctctcacttggcacgacgtgttggcacaagaaaagctacagccttatttt
attaatacccttgaatttattaaaaaagaacgagccgcaggtaaaataatttatccgccg
caaaaggatgtgttcaacgcatttcgctttaccgaactacaccaggttaaggtcgttatt
ctgggacaagatccctaccacggcccaaatcaggcgcacgggctgtcattttcagtgcgt
ccaggtgtgcccgcgccgccttctctggtcaacatctataaagagctggcgagcgatatt
cctgggtttgaaattccgcgtcatggctttttacaaagttgggcggagcaaggggtattg
ctgctcaatacggtattaactgtagaagccgggcgggcgcattcacatgctaatttgggt
tgggagacctttaccgatcgcgtcattgcagccttgaatgaacagcgggaaggcttggtc
tttctgctttggggttcacatgcccaaaagaagggcagcattattgatcaacggcgccat
catgtcctgaaatcgccgcatccctccccactctctgcgcaccgcggtttctttggctgc
aaacatttctcgcaggctaaccagtttcttgaacagcaggggttatcccccatagactgg
acacccaaacttcaggaaaacgcttaa
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