Physeter macrocephalus (sperm whale): 102975941
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Entry
102975941 CDS
T06011
Symbol
TAF1A
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcad03021
]
102975941 (TAF1A)
Transcription machinery [BR:
pcad03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
102975941 (TAF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
COG4_N
Motif
Other DBs
NCBI-GeneID:
102975941
NCBI-ProteinID:
XP_007127546
Ensembl:
ENSPCTG00005003145
UniProt:
A0A2Y9FNN1
LinkDB
All DBs
Position
4:complement(21225356..21259686)
Genome browser
AA seq
450 aa
AA seq
DB search
MSDFSEELIRPTTEDEQGEPHVPSGTGICLPWLQKHIETIATGGKQEKDFAQTTSACLSL
IQEALLKHQWQRAAEYMHSYFQILEDSDSNKRQIAPEIIWRLGSEILYYHPKSNVETFNT
FADRMKNIGVMNYLKISLQHALYLLHHGMLEDANRNLSQAETWRYGEKSSSQEVLINLIQ
AYKGLLQYYIWSKKKMELSQLDEDDYAYNTASQNMLNHSWKTSINLCALIQIPGVWDPFV
KSYVEMLEFYGDQDGAREVLTNYAYDEKFPSNPNAHIYLYNFLKREKAPREKLISVLKIL
YQIVPSHKLMLEFHRLLRKSENEEHHKLGLEVLFGVLDFAGCTKNITAWKYLAKYLRQTL
MGSHLAWVQEEWNSRKNWWPSFHFSYFLAKSDWKEDKTLACEKALVAGLLLGRGCRYFRN
ISKQDHQVLKKKIKQVKKSVKKYSIVNPGL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttcagtgaggaattgataaggcccacaacagaggatgaacagggggaaccg
catgtgccctctggtacaggaatatgtcttccttggctccaaaagcatatagaaaccata
gcgactggaggaaaacaagagaaggattttgctcagacaacaagtgcttgtttaagtctt
atccaagaagctctgctgaagcaccagtggcagcgagctgcagaatacatgcacagttac
tttcagatcttggaagattcagatagcaataaaagacagattgcaccggagattatttgg
aggcttggaagtgaaattctttattatcatcccaaaagcaatgtggagactttcaatacc
tttgctgaccggatgaaaaatattggtgtcatgaattacttgaagatctccttacaacat
gcattataccttctgcatcatggtatgcttgaggatgcaaacagaaatctcagccaggca
gagacatggcgatatggtgaaaagtcgtcttctcaggaagtgttaatcaaccttattcag
gcctataaaggtcttttgcagtattatatttggtctaaaaagaagatggaattgtctcag
cttgatgaggatgattatgcttacaacacagcgtcccagaatatgctcaaccacagctgg
aagacatctataaacctttgtgcattgattcaaattcctggagtttgggacccctttgtg
aagagttatgtagagatgctggaattctatggggatcaagatggagcccgagaggtgctt
accaattacgcctatgatgaaaagttcccatcaaatccaaatgctcatatctacttatac
aactttttaaagagagagaaggcaccaagagagaaactgataagtgtgcttaagattttg
tatcagattgtaccatctcataaactgatgttagaattccatagattactgagaaaatca
gaaaacgaagaacaccataaactggggttggaggtattatttggagtcttagattttgct
ggatgcactaaaaatattactgcttggaaatatttggcaaaatatctcagacagacttta
atgggtagtcatcttgcctgggttcaggaagagtggaactccaggaaaaactggtggcca
agctttcacttcagctactttctggcaaaaagtgattggaaggaagataaaactttggct
tgtgagaaagctttggtagctgggttattgttaggaagaggttgtagatattttcggaat
atttcaaaacaagatcatcaggtcttaaagaagaaaattaagcaggtgaagaagtcagtg
aaaaaatacagcattgtaaatccaggactctga
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