Physeter catodon (sperm whale): 102988646
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Entry
102988646 CDS
T06011
Symbol
SLC6A12
Name
(RefSeq) sodium- and chloride-dependent betaine transporter
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad04721
Synaptic vesicle cycle
pcad04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
102988646 (SLC6A12)
04721 Synaptic vesicle cycle
102988646 (SLC6A12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcad02000
]
102988646 (SLC6A12)
Transporters [BR:
pcad02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
102988646 (SLC6A12)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
102988646
NCBI-ProteinID:
XP_007117129
Ensembl:
ENSPCTG00005010630
UniProt:
A0A2Y9F8B9
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Position
6:55289364..55306428
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AA seq
617 aa
AA seq
DB search
MAADDRKVAVPKDGPSVVSWVPEEGEKLDQEGKDQVKDRGQWSNKMEFVLSVAGEIIGLG
NVWRFPYLCYKNGGGAFFFPYFIFFFTCGIPVFFLEVALGQYTSQGSVTAWTKICPLLQG
IGLASVVIEAYLNVYYIIILAWALFYLFSSFTSELPWTACTHSWNTGHCVDSLNRSAAGA
AAPPVNFTSPVMEFWERRVLGLSSGIHELGALRWELALCLLLAWVVCYFCIWKGVKSTGK
VVYFTATFPYLMLVILLIRGITLPGAYEGIIYYLKPDLLRLKDPQVWMDAGTQIFFSFAI
CQGCLTALGSYNKYHNNCYRDCIALCFLNSGTSFVAGFVVFSILGFMSQEQGVPISEVAE
SGPGLAFIAFPKAVSMMPLSQLWSCLFFIMLIFLGLDSQFVCVECLVTASVDMFPRQLRK
SGRRELLILAIAVTCYLIGLFLVTEGGMYIFQLFDYYACSGTCLLFLSVFEVICIGWVYG
ADRFYDNVEDMIGYRPWPLVKISWLFLTPGLCLATFLFSLSKYTPLRYNNVYVYPAWGYF
IGWLLAGSSMCCVPLFTAITLLKTQGSFRKRLQQLVTPDPSLPQPKRHLCLDGGSGQDCG
PSPTKAGLMAGEKETHL
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacgacagaaaagtggcagttcccaaggatgggccttctgtggtctcctgg
gtccctgaggagggagagaagttggaccaggaaggcaaggaccaggtgaaggatcggggc
cagtggagcaacaagatggagttcgtgctgtccgtggccggggagatcatcgggctgggc
aacgtctggaggtttccctacctctgctacaaaaacgggggaggagccttcttcttcccc
tacttcatcttcttcttcacctgtggcatcccagtgttcttcctggaagtggcgctgggc
cagtacaccagccagggcagcgtcacagcctggacgaagatctgccccctcctccagggc
attggcctggcgtctgtggtcatcgaggcctatctgaacgtctactacatcatcatcctc
gcctgggccctcttctacctgttcagctcctttacctccgagcttccctggaccgcctgc
acccactcctggaacacaggacactgcgtggactccctgaaccgctcggcagctggcgca
gcggccccgcccgtgaacttcacctcccccgtcatggaattctgggagagacgtgttctg
ggcctcagctccggcatccacgagctgggggccctgcgctgggagctggccctctgcctc
ctgcttgcctgggtcgtctgctacttctgcatctggaagggggtcaagtccacgggcaag
gttgtctacttcacggccacgttcccctacctgatgctggtcatcctgctgatccgaggt
atcaccctgcccggagcctacgagggcatcatctactacctaaaaccagatttgcttcgg
ctcaaggacccccaggtgtggatggacgcgggcacccagatcttcttctccttcgccatc
tgccaggggtgcctgacggccctgggcagctacaacaagtaccacaacaactgctacagg
gactgcatcgccctctgcttcctgaacagcggcaccagcttcgtggccgggtttgtggtc
ttctccatcctgggcttcatgtcccaggagcagggggtgcccatctctgaggtggccgag
tcaggccctggtctggccttcattgccttccccaaggctgtgagcatgatgcccctgtcc
cagctgtggtcctgcctcttcttcatcatgctcatcttcctcgggctggacagccagttt
gtctgtgtggagtgcctggtgacagcctccgtggacatgttccccaggcagctccggaag
agcgggcggcgggagctcctgatcctcgccatcgcggtcacatgctacctgatcgggctc
ttcctggtcaccgagggcgggatgtacatcttccagctgtttgattattacgcctgcagt
ggcacgtgcctgctgttcctttccgtgtttgaagtgatctgcatcggctgggtgtatggg
gctgaccgtttctatgacaacgtggaggacatgattggctaccggccgtggcccctggtg
aagatctcctggctcttcctgaccccgggcctttgcctggccactttcctcttctccttg
agcaagtacacacctctcagatacaacaacgtctacgtgtacccggcctggggatacttc
atcggctggctcctggctggctcctccatgtgctgtgtcccactgttcaccgccatcacc
ctcctgaagacccagggttccttcaggaagcgcctgcagcagcttgtcacccctgacccc
agcctgccacagcccaagcggcacctgtgtctggacggtggcagcggccaggactgcggg
ccctccccaacgaaggcgggtctcatggctggggagaaggagacgcacttgtag
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