Physeter macrocephalus (sperm whale): 102992736
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Entry
102992736 CDS
T06011
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X13
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pcad04990
]
102992736 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
pcad04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
102992736 (LIMCH1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
102992736
NCBI-ProteinID:
XP_007125232
Ensembl:
ENSPCTG00005012462
UniProt:
A0A2Y9FJX5
LinkDB
All DBs
Position
7:complement(77545256..77910689)
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AA seq
1087 aa
AA seq
DB search
MACAALGLEALQPLQPEPPPEPAFSEAQKWIEQVTGRSFGDKDFRTGLENGILLCELLNA
IKPGLVKKINRLPTPIAGLDNIILFLRGCKELGLKESQLFDPSDLQDTSNRVTVKSLDYS
RKLKNVLVTIYWLGKAANSCASYSGTTLNLKEFEGLLAQMRKETDDVESPKRSIRDSGYI
DCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSRQTPSPDVVLRGSSDGRGSDSESDLPHR
KLPDVKKDDMSARRTSHGEPKSAVPFNQYLPNKSNQTAYVPAPLRRKKAEREEYRKSWST
ATSPLGGERPFRYGPRTPVSDDAESTSMFDMRCEEEAKVQPHSRARQEQLQLINNQLREE
DDKWQDDLARWKSRRRSASQDLIKKEEERKKMEKLLAGEDGTSERRKSIKTYREIVQEKE
RRERELHEAYKNARSQEEAEGILQQYIERFTISEAVLERLEMPKILERSHSTEPNLSSFL
NDSNPMKYLRQQSLSPPKFTATVETTIARTSVLDASMSAGSGSPSKTVTPKAVPMLTPKP
YSQPKNSQEVLKTFKVDGKVTMNGETVHVDEEEKERECPTVALAPSLTKSQMFEGVARVH
GSPMELKQDNSSIEINIKKPSSLPQELTATTEETETNSQEDANDGEKTEKGNTEVASSEP
QYFTSTVTRSSPTVAFVELSSSPQVKNEVPEEKDQKKPENEMSGKVELVLSQKVVKPKSP
EREATLTFPFLDKMPESSQLPLPNLSSQVDSPSSEKSPVTTPLKLWAWDPEEERRRQEKW
QQEQERLLQERYQKEQDKLKEEWEKAQKEVEEEERRYYEEERKIIEDTVVPFTVSSSSAD
QLSTYSSVTEGSGTVNKMDLENCREEEQKTRQKKPFQGDNSGSLLKTKEGDPLEEKGSLT
QGVLTHSENPALKGIYQDLQLDTEAGASLCGMNPQLAQDPSRNQQVSNPPMHILEDVKPK
TLPLDKSINHQIESPSERRKKSPRENFQAGHLSPCSSTPPGQSPNRYKRSISGKKLCSSC
GLPLGKGAAMIIETLNLYFHIQCFRCGICKGQLGDAVSGTDVRIRNGLLNCNDCYMRSRS
AGQPTTL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtgccgctctcggtctggaagctcttcagcccctgcagcctgagccgcccccc
gagcccgccttctccgaggcgcagaagtggatcgagcaagtaactggcagaagttttggt
gataaagattttcggacagggttagaaaatggaatccttctctgcgagttgctgaatgct
ataaagccaggacttgtcaaaaagatcaatagattgcctacccccattgcaggattggac
aatatcatattattcttgagaggttgtaaagagctcggccttaaagaatctcaacttttt
gacccgagtgacctacaggatacgtccaacagagtaacagtcaagagccttgattatagc
aggaagctgaaaaatgtactagtgactatttactggctgggcaaagcagcaaatagctgt
gcatcttacagtgggacaacgctaaacctgaaggagtttgaaggcttgctggctcagatg
agaaaggagactgatgacgttgagagccctaaacgtagtattcgagacagtggctacatc
gactgctgggactcagagcgcagcgactccctctctccccctcgacacggcagagatgat
tccttcgatagcctggattccttcggctcccgttcccggcagacaccttcgccagatgta
gtcctcaggggaagcagtgatgggagaggaagcgactctgaatccgacttgccccatcgg
aagctgccggatgtgaagaaggatgacatgtctgcaaggcggacttcccacggtgagcca
aaatcagcagtgccttttaaccagtacctccccaacaaaagcaaccagacagcctacgtc
cccgcacctctgagaaggaagaaagcagagcgagaggaatatcggaagagctggagtact
gccacctcccccctgggtggggagaggcccttcagatacggaccgagaactcctgtgtct
gatgacgcagagagcacgagtatgtttgacatgcggtgtgaggaggaggccaaggtgcag
ccgcacagcagggcccgccaggagcagctgcagctgataaacaaccagctgcgggaagag
gatgacaaatggcaagatgacctggctcgttggaagagccgtagaagaagtgcttctcag
gacttaatcaagaaagaggaagaaaggaaaaaaatggagaagttactggctggagaggat
gggacaagtgaacgaaggaaaagcatcaaaacctacagagaaattgtccaggaaaaggag
cggagagagagggagctgcatgaggcatacaagaatgcacggtcccaggaggaggcggaa
gggatccttcaacagtacatcgagaggttcaccatcagcgaagctgttcttgaacgcttg
gagatgccaaaaattctggaaagaagccattcaacagagccaaacttatcctccttcctg
aatgactccaaccccatgaaatacctgcggcaacagtcactatctccacccaaattcact
gccactgtggaaaccaccatcgctcgtaccagtgtactggatgccagcatgtcagcaggc
agtgggtctccaagcaaaactgtcactcccaaagcagtgcctatgctgacacccaagcct
tactcccagcccaaaaactctcaagaggtcctgaagaccttcaaggtggatgggaaagtc
accatgaatggagagacggttcacgttgacgaggaggagaaggaaagagagtgtcccacg
gtggcacttgccccctcgttgaccaaatcccagatgtttgaaggtgtggccagagtgcat
gggtcccccatggagctgaaacaagacaacagtagcattgagatcaacataaagaagcca
agttctcttccccaagagctgacggcaaccactgaagaaactgaaacaaacagtcaagaa
gatgcgaatgatggtgaaaaaacagaaaaagggaatacagaagttgcctcatcagagcca
cagtattttacatcaactgtgactcgatccagcccgaccgtggcctttgtggagctttcc
tccagcccccaggtgaagaacgaggtgccagaagagaaagaccagaagaaaccggaaaat
gaaatgagtggaaaggtggaactggtgctgtcacaaaaggtggtaaagccaaaatctcca
gaacgagaagcaaccctgacgtttccatttctggacaaaatgcctgaaagcagccaatta
cctttgccaaatctcagttctcaagtggattctccaagcagtgaaaagtcacctgtaact
acgcctttgaagttgtgggcatgggacccggaagaggaacgcaggcgacaggaaaaatgg
caacaagagcaggaacgtctgctccaggagagataccagaaggagcaggacaagctgaag
gaagagtgggaaaaggcccaaaaggaggtggaagaggaagaacgcagatactatgaggag
gagcgcaaaataattgaggacactgtggttccatttactgtttcttcaagttctgcagac
cagctgtctacatactcctctgtgactgaaggcagtgggacagtgaataagatggacttg
gaaaactgtcgagaggaagaacaaaagacaagacagaagaaaccattccagggagataac
agtggctcattgcttaagactaaggaaggtgatccactggaggaaaagggcagcctaact
caaggagtcttgactcattctgagaaccctgcattgaaaggaatctatcaggacctccag
ctggatacagaagctggggcctcactctgtgggatgaacccacagctagctcaggatcca
tcccggaatcagcaggtatcaaacccaccaatgcacattttagaagatgtgaagccaaaa
accctcccattggacaaaagcattaatcatcagattgagtctccgagtgaaaggcggaag
aaaagcccacgagagaacttccaggctgggcacttgtccccctgctcctccacccctcct
ggccagtcaccaaacaggtacaagaggtctataagtgggaagaagctgtgttcttcgtgt
gggcttccattgggtaaaggagctgcaatgatcatcgagaccctcaatctctattttcac
atccagtgctttaggtgtggaatttgcaaaggacagcttggagatgcagtgagtgggacg
gatgttaggattcgaaatggtcttctaaactgtaatgactgctacatgcgatccagaagt
gctggccaacccacaacattgtga
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