Physeter macrocephalus (sperm whale): 102993899
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Entry
102993899 CDS
T06011
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03082
ATP-dependent chromatin remodeling
pcad05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102993899 (SS18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
102993899 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcad03036
]
102993899 (SS18)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102993899 (SS18)
GBAF(ncBAF) complex
102993899 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
102993899
NCBI-ProteinID:
XP_007118335
Ensembl:
ENSPCTG00005022418
UniProt:
A0A2Y9FAK3
LinkDB
All DBs
Position
19:complement(39846892..39923247)
Genome browser
AA seq
418 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVAGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPSQLNITNSSMNMPSSSHGSMGGYSHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNIQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
GNHMMAQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPTQQQQYPGQQGYPG
QQQAYGPSQGGPGPQYPNYPQGQGQQYGGYRPAQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggcgttcgcggccccgaggcagcgcggcaagggggagatcactcccgctgcg
attcagaagatgttggatgaaaataaccatcttattcagtgcataatggactatcagaat
aaaggaaagacctcagagtgttctcagtatcaacagatgctgcatacaaacttggtctac
cttgctacaatagcagattctaatcaaaacatgcagtctcttttaccagcaccacccacg
cagaatatgcctatgggtcctggagggatgaatcagagcggccctcccccacctccacgc
tcacacaacatgccttcagatggaatggtagctgggggtcctcctgcaccacacatgcag
aaccagatgaacggccagatgcctgggcctaaccatatgcctatgcagggacctggaccc
agtcaactcaatatcacaaacagttccatgaatatgccttcaagtagccacgggtccatg
ggaggttacagccattccgtgccatcgtcccagagcatgccggtacagaaccagatgacc
atgagtcaagggcagccgatgggaaactatggccccagaccaaatatgaatattcaacca
aaccaaggtccaatgatgcaccagcagcctccttctcaacagtacaatatgccgcaggga
ggtgggcagcattaccaaggccagcagccacctatgggaatgatgggtcaagttaaccag
ggcaatcatatgatggcacagagacagattcctccctatagaccaccgcaacagggccca
ccacagcagtactcaggccaggaagactattatggggaccagtacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggagggaattcacagtatggccaacagcaagatgcttaccaaggaccacct
ccccaacagggatatccaacccagcagcagcagtacccagggcagcagggctacccagga
cagcagcaggcctacggtccttcgcagggtggtccaggtcctcagtaccctaactacccg
caggggcaagggcagcagtatggaggttacagaccagcccagcctgggccaccccagccc
ccgcagcagaggccttacgggtatgaccagggacagtatggaaattaccagcagtga
DBGET
integrated database retrieval system
