Physeter catodon (sperm whale): 112065416
Help
Entry
112065416 CDS
T06011
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
pcad
Physeter catodon (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcad04515
]
112065416
Cell adhesion molecules [BR:
pcad04515
]
Cadherins
Protocadherins
112065416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
112065416
NCBI-ProteinID:
XP_023981705
UniProt:
A0A2Y9SYS1
LinkDB
All DBs
Position
13:27089552..27091620
Genome browser
AA seq
690 aa
AA seq
DB search
MSQWRLRFPADTLHRAGLGSLLFLLLLLLVSGSCTETVNFLTYEEEALGTFISVLSDHIL
FNSQREVPGQFRLIKFNSSLIQVQEGDXVLGDAGLDLERVCGQAFKVVSFWREQFRRVHV
EVEVRDVNHHEPRFSRAQIPEEVSEGAAVGTRISLEVPIDEDVEANGLQSVRLAEPHSPF
RVELQTRADGAQCADLVLLQELDRESQAAYNLELVAQDGGRPPRSATAALSVRVLDANDH
SPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEGPNGDVVFAFGSRTPPEARRLFRLDP
RSGRLTLAGPVDYERQDTYELDVRAQDRGPGPRAATCKVIVRISDVNDNAPDIAITPLAA
PGAPVASPLAAAAAALGGANATSSTGPGTPEAGAISLVPEGAARESLVALVSTSDRDSGA
NGQVRCALYGHEHFRLQPAYAGSYLVVTAGSLDRERIAEYNLTLVAEDRGAPPLRTVRLY
LVRVRDENDNEPLFTRPVYEVSVRENNPPGAYLATVAAXDTDLDRNGQVAYRLLEAXVST
YVSLDPVTGELHARQCFDREELAELRLGLEALDGGSPPLRGRAVVRLHVEDQNDHEPRLV
TPPLVSDSGQAPLPRDAPLGYLLTRLQARDADQDLNAELTYILLRSDCGPGALALHPATG
ELSLQCRLSPQPADPLTAAVVVLDGGRPAR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtggaggctcagattccccgctgacactttacacagggctggactggggtcc
ctgttgtttctgctgctgctgcttctggtgtcagggtcttgcaccgaaactgtcaatttc
ctcacttacgaggaagaagccctcggcaccttcatcagtgttctgtctgaccacatcctg
tttaactcccagcgcgaggtgccaggccagttccgcctgattaagttcaacagctcgctg
atccaggtgcaagagggcgacnncgtcctcggagacgcgggcctggacctcgagcgagtg
tgtggccaggccttcaaagtggtcagcttttggcgggagcagttccggcgggtgcacgtg
gaggtggaggtgagggacgtcaaccaccacgagccacgattttcccgggcccagatcccg
gaggaggtgtccgagggcgcggccgtgggcacgcgcatttccctggaggtgcccatagac
gaggacgtagaggccaatgggctgcagagcgtgcgcctggccgagccgcacagccccttc
cgcgtggagctgcagacgcgcgcggacggtgcccagtgcgccgacctggtgctgctgcag
gagctggaccgcgagagccaggccgcctacaacctggagctggtggcccaggacggaggc
cgcccgccgcgctccgccacggccgcccttagtgtgcgcgtgctggacgcgaacgaccac
agcccggccttcccgcagggcgccgtggccgaggtggagctggcggaggacgcgcccgtg
ggctcgctacttctcgacctggacgcggcggaccccgacgagggccccaacggcgacgtg
gtgttcgccttcggctcccgtaccccgcccgaggcgcgccgcctcttccgcctcgacccg
cgctcgggccgcctcaccctggccgggcccgtggactacgagcgccaggacacttacgag
ctggacgtgcgggcgcaggaccgcggccccgggccccgcgccgccacctgcaaggtcatc
gtgcgcatcagcgacgtcaatgacaacgcaccggacatcgccatcaccccgctggccgcc
ccgggcgcgcctgtcgcctcgcccttggccgccgccgccgctgctctcgggggtgcgaac
gcgacctcgtcgaccgggcccgggacgccagaggccggagccatctcgctggtgccagag
ggggcggcacgcgagagcctggtggcgctggtcagcacctcggacagggactcgggagcc
aacgggcaggtgcgctgcgccctctatgggcacgagcacttccggctgcagccggcctac
gcgggcagctacctggtggtgaccgcggggtcgctggaccgcgagcgcatcgccgagtac
aacttgacgctggtggccgaggaccgcggcgcgcccccgctgcgcaccgtacggctctac
ctggtgcgggtgagagacgagaacgacaacgagccgctcttcacgcggccggtctacgag
gtgtcggtgcgtgagaacaacccgcccggggcctacttggccacggtggccgccnaggac
accgacctggaccgcaacggccaggttgcctaccggctgctggaggctnccgtgtccacc
tacgtctcattggaccccgtcactggggagctgcacgcacgacagtgctttgaccgcgag
gaactggctgagctgcggctggggctggaggcgctcgacggcggctctccgccgctccgg
ggccgggccgtggtgcggctgcatgtggaggaccagaacgaccacgagcctcggctggtg
accccgccactcgtcagtgactcaggccaggcccctctgccccgggacgcgcccctgggc
tacctgctgacccgactgcaggctagggacgcggaccaagacctcaacgcggagctgact
tacatcctgctccgcagcgactgcggtcccggggcgctagcgctacacccggccacgggt
gagctgtccctgcagtgccgcctgtccccgcagcccgccgacccgctgacggcggccgtc
gtggtgctggacggaggccggccggcccggtaa
DBGET
integrated database retrieval system
