Physeter macrocephalus (sperm whale): 114484105
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Entry
114484105 CDS
T06011
Symbol
SMG9
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9 isoform X1
KO
K18735
protein SMG9
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
114484105 (SMG9)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
114484105 (SMG9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6079_1st
AAA_30
Motif
Other DBs
NCBI-GeneID:
114484105
NCBI-ProteinID:
XP_028334057
Ensembl:
ENSPCTG00005004696
UniProt:
A0A455AD38
LinkDB
All DBs
Position
17:9850759..9860768
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AA seq
343 aa
AA seq
DB search
MSESGHSQPGLYGIDRRRRWKEPGPGGPQNLSGPGGRERDYIAPWDRERRDGSEETSTAV
MQKTPIILSKPPAERSKQPPTPTAPAAPPAPAPLEKPIVLMKPREEGKGPAATASASTPE
GTAPPPTAAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPPERMKHS
IKLVDDQMNWCDSAIEYLLDQTDVLVVGVLGLQGTGKSMVMSLLSANTPEEDQRAYVFRA
QSAEMKERGGNQTSGIDFFITQERIVFLDTQVLTPHSPHPAACSTHLHPQMCLSQNPAWI
PWGSGQAMDMLVPLGKLCLFLALSLFLSDFTPSPLPSIVYTGA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtctgggcacagtcagcctgggctctatgggatagacaggcggcggcggtgg
aaggagccaggccctggcggcccccagaatctctccgggcctggcggtcgggagagggac
tacattgcaccttgggacagagagagacgggatggcagcgaagagacaagcacggcggtc
atgcagaaaacccccatcatcctctcaaaacctccagcagagcggtcaaagcagccaccg
actccaacggcccctgccgccccgcctgccccagcccctcttgagaagcccattgtcctc
atgaagccacgggaggaggggaaagggcctgcggccacagcgagtgcctccacccccgag
ggcactgcgccgccacccactgcagcccctgcaccacccaagggggagaaggaggggcag
agacccacacagcctgtgtaccagatccagaaccggggcatggggactgccgcgccggca
gccatggaccctgtcgtgggccaggccaaactgctgcccccagagcgcatgaagcacagc
atcaagttggtggatgaccagatgaattggtgcgacagtgccattgagtacctgttggat
cagaccgatgtcttggtggttggtgtcctgggcctccaggggacaggcaagtccatggtt
atgtcgttgttgtcagccaacactcctgaggaggaccagagggcctatgtcttccgggcc
cagagtgccgaaatgaaggaacgagggggcaaccagaccagtggcattgacttctttatt
acccaggagcggatcgttttcctggacacgcaggtgctgaccccccactcaccccaccct
gctgcatgcagcactcaccttcatccccaaatgtgtttaagccagaaccctgcttggatt
ccatggggctccggccaagccatggacatgctagtgcctttgggcaagttgtgtctcttt
ttggcccttagtctcttcttgtccgatttcaccccctctcccctcccatccatcgtgtac
acgggagcctaa
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integrated database retrieval system
