Pituophis catenifer annectens (San Diego gophersnake): 139310981
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Entry
139310981 CDS
T11059
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcae04040
]
139310981 (TRPC4)
Ion channels [BR:
pcae04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
139310981 (TRPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
139310981
NCBI-ProteinID:
XP_070791388
LinkDB
All DBs
Position
Unknown
AA seq
969 aa
AA seq
DB search
MAQFYYKRSINAPYRDRIPLRVVRAESELSPAEKAYLNAVEKGDYASVKQVLEEAEIYFK
ININCIDPLGRTALLIAIENENLEFIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPTLLDTQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELEIILNYRDDNSLLEEQSENDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRHHWAVKMLTCIIVGFLFPAFSVCYLIAPKSRLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNMQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFSKYSGLLARQSWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETNEPDRCKGIRCENQNNAFSTLFETLQSLFWSVFGLINLYVTNVKARHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLLRWLWRRLCRQNIKKKTKSFGTIGRRAADNLRRHHQYQEVMRNLVKRYIAA
MIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLKGNKLANLQHSKTSTEVSSLTESNEG
SESGGNEKIMKKNLSLFKITTMIHPRVVAKVSKAHNQSNGSAMMPTESTKDKQKKVSFVA
DVKKLRLFHRHSNNSSTEHSTNKIYSISEEISHQQAEKHKVIELGDKSLAVNCELNKHDL
SAKYTVPSNKQGRKETFNSMLNKKTAPSGWKITKGQGSDFPREMLNNEQDISILKEETNI
QSSYMTTRL
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggcccagttctattataagagaagcatcaatgccccttacagagatcgcatccctctt
cgcgtcgtacgagcagaatctgaactctcccctgctgagaaagcctatttgaatgctgta
gaaaaaggagattatgccagtgtgaagcaagtcttggaagaagcagaaatttatttcaag
atcaatattaattgcattgatcctcttggaagaacagctcttctcattgcaatagaaaat
gaaaacttggagttcatagagttgctcttgagctttaatgtctatgttggagatgctctg
ctacatgccataaggaaagaggtggttggtgcagttgagctactcctcaatcacaagaag
cccagcggggaaaaacaggtaccacccacgttactggatacacagttctctgaatttaca
ccagatataacacccattatcttggctgcccatacaaacaattatgagatcataaaactt
ttagttcagaaaggtgtgtctgttcccagaccacatgaagttcgctgtaactgtgtggaa
tgtgtctccagttcagatgtggatagccttcgccattcccgatccagactaaatatctac
aaggctcttgcaagcccatctttaattgctctatcaagtgaggacccatttcttacagca
ttccagttaagttgggaacttcaagaactgagcaaagtggaaaatgagtttaaatcggaa
tatgaagaattgtcacaacagtgcaagcagtttgcaaaagatttgttggatcagactcga
agttcaagagaattggaaattattcttaattacagagatgataacagtctactagaagag
cagagtgaaaatgatttggcaagattaaaactggcaattaaataccgtcaaaaagagttt
gttgcccaaccaaactgtcaacagttacttgcctctcgttggtatgatgagttcccaggc
tggaggagacaccactgggctgtgaagatgctgacttgcatcattgttggattccttttc
cccgcattctctgtctgctacttgatagctcccaagagccgactgggactgttcatcagg
aagccattcatcaaattcatctgccacactgcctcctacttgactttcttgtttcttctt
ctacttgcctctcagcatattgacaggtcagatctgaatatgcaagggcctccaccgacc
atcgttgaatggatgatcttaccatgggtcttgggatttatttggggtgaaattaaacaa
atgtgggatggtggcctgcaagattacattcatgactggtggaatctgatggattttgtt
atgaattctctatacctggcaacaatatcactgaaaatagttgcattttcaaagtacagt
gggctgcttgcaagacagagctgggatatgtggcatccaacactggttgcagaggccctg
tttgctattgcaaatatttttagttctttgcgtctaatatcattattcactgcaaattct
cacttgggaccactgcagatctctcttggaagaatgctactggatattttaaaatttctg
ttcatctactgtcttgtactgctagcttttgcaaatggacttaatcagctctatttttat
tatgaaacaaatgaacctgatcgctgcaagggaatacgctgtgaaaatcaaaataatgca
ttttcaactttatttgaaactctccagtcattattttggtcagtctttggactcataaat
ctatatgtgaccaatgttaaagctcgacatgaattcactgagtttgttggagccactatg
tttggcacctataacgtcatctcactggtggtcctgcttaatatgttgatagccatgatg
aacaattcctaccagcttattgctgatcatgcagatattgaatggaaatttgctcgtaca
aagctatggatgagttactttgaagaaggtggaactttgcccacgcctttcaatgtcata
ccaagtccaaaatctctatggtatttgttaagatggctgtggagacgactatgcaggcaa
aacattaaaaaaaaaaccaaaagctttggaaccattgggagacgtgcagcagataatttg
agaagacatcatcagtatcaggaggtgatgaggaatttggttaagagatacatagcagca
atgataagagatgctaaaactgaagagggactaacagaagagaattttaaggaattaaag
caagatatttccagttttcgctttgaagtattgggtcttttaaaaggaaacaaactggct
aatttacaacactctaaaacaagtacagaagtctcctccttgacagaatctaatgaagga
agtgaaagtggaggaaatgaaaaaatcatgaagaaaaacctcagtcttttcaaaataact
acaatgattcacccaagagtagtagcaaaagtctctaaagcacacaaccaaagcaatggg
tcagcaatgatgccaactgagtccacaaaggacaaacaaaagaaagtaagctttgtagct
gatgtaaaaaaacttaggttgtttcatagacattcaaataatagctctactgagcacagt
acaaataaaatttattcaatttctgaagaaatttcccatcaacaagcagaaaaacataaa
gtaattgaactgggcgataaatcattggctgtgaactgtgagctaaataaacatgatctc
agtgcaaagtacacagttcccagtaataagcaaggtagaaaggagactttcaactctatg
ctgaataagaaaactgctccttctggctggaaaatcaccaaggggcagggttcagatttc
cccagagaaatgctaaacaatgagcaggacatcagcatcttaaaggaagaaacaaatatt
cagagtagctatatgacaacaaggttgtga
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