Pituophis catenifer annectens (San Diego gophersnake): 139320172
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Entry
139320172 CDS
T11059
Symbol
SH3TC1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcae04131
]
139320172 (SH3TC1)
Membrane trafficking [BR:
pcae04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
139320172 (SH3TC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_8
TPR_10
ARM_TT21
TPR_1
SH3_1
Glutaminase
Csd3_N
Motif
Other DBs
NCBI-GeneID:
139320172
NCBI-ProteinID:
XP_070804462
LinkDB
All DBs
Position
Unknown
AA seq
1266 aa
AA seq
DB search
MEFWPQQTRKHLRPQRGEGKRKTERLFLGTFPLTINLAFSALFLKITLIRRRTGLPDSQL
QEHLQGRLRLLENDSQRAVAVFSELSARLLSIHSEGHLIAITFWTLEEIWKFITYYSLGF
LNPCLETLLLDDSLWLSSPEEAAGIEVLLDENCLHRIYRGLLIQEGAYFGFCPENVDAAN
PSQVESAAPEQVRNDHPTDVLESPVPFHQWFLKANAASDGLACITALPVTDQAATGLSIA
VVSHESAVPDEISFQNGDKMEIIGYFMKCMPWFVGRHLSSGQVGFVQSSCVEPEGFLAMA
TELPYMDFFREDGDSFMKEESLLDNLIRLLAHGSQESICSVYQIDAQNDVGLQKPHEEEM
PPSFFSEKESPTPCRAVRSLMKMKDFQPTEDKQQQQLPTCHRQEPPLSQKPCFSMCQDGT
LGPEIPDLLLSFLNQEGYEDGFGGLYDPPLSFLKTSIHGDATEEELMDYLARARAVARQA
DLPWATTRLCYLLGRMSLRRFKLSQARVYFEEALATLRGDFRDLHLVATLYTHLTGIYLK
QKNVEKSASFLDKAASLLMGLASDTDGAEMALEILKYALKRAVLSQSRNAEARACFLLAK
HCLSFKQGQEPAPFLERLQLLLNTGQGLPSGRGSVDCYLKLGQLYSQKCLPRLALSCAKV
VFSHSSCSLLEQFRTIDLVLRNASKVHSPTPGGQTHPSLVAFYLRELLHALEGSRGSQKL
CSVIYYELSQLHSRYKQYEEAIGYMEEVLELNTSGRVVEDTISHFIFLSWLYILHQQTDT
ALCILNAVAESPWSTRQQLGVIHNMAAISLRQRNQPRRAVESYFKALSISRETGSVANEA
VALANLGILCLHSSAQSLGEHFLIKAIQLFSELSSGECGGNFVAILLRLGHHYTRGAQKE
KGRNCYEWAFLVAMEREDVEGQLQAVQHLCHFHSTVVPDPAQCVLYNEYQLTLVRKMSDK
VMEGQVLETISHLYLSLGTERACRSALDYLKRSLGIFIDLQAKNKEAQAWLQAGRIYYAL
RENELVDVYIQVAHNVALSSQDPNLEMEMLEASGDIFFNGDWEKEKAAPFYRDKALPLAT
KAKNGSAELRLFNKLVGLFLTLQKYEECLGYAQTSLMLSVDLGDQLSERVAYHRLAVIHH
HLGQCELAEHFFLKAVSLCPSPLEFDEEALYYVKVYLLLGDITFYDLKDPFDAAGYYNLA
LAAAMDLGNKKAQLKIYTRLAIIYHNFLIDREMSLFFYQKARAFATELNICRINLSPDQP
PRRKVL
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggagttttggccccaacagaccagaaagcacctccgccctcaacggggagaaggtaaa
aggaaaaccgaacggctgttcctggggacgtttccattaaccataaacctggcattttca
gctctcttcctgaagataaccctgatcagacgaaggacgggccttcccgattctcagctg
caggagcatctgcagggaagactccgtctcctggagaatgacagccagcgggccgtggcg
gtttttagtgagttgtcggccagattgctgtccatccacagtgaaggccatctcatcgcc
atcacattttggaccttggaggaaatctggaagtttataacttactattctcttggtttt
ttaaatccctgcctggagactctgttgctggatgactctttgtggctctcttcaccagaa
gaagctgctggaattgaggtcctcttagatgaaaattgtctccatcggatctacagagga
ctcttaattcaagaaggtgcctattttgggttttgtcctgagaacgttgatgcagccaat
ccaagccaagtggaatcagcagctccagagcaagtccggaatgaccaccccacagatgtc
ttggagtccccggtgcctttccatcaatggtttctgaaagcaaacgcagcatctgatggg
ttggcctgcataactgcacttccagtcacagatcaagcggccacaggattatctatcgca
gtcgtcagccacgagagtgctgtgccggacgagatcagtttccaaaacggagataaaatg
gaaatcattggctatttcatgaaatgcatgccttggtttgtgggaagacatctctcttcg
ggccaggttggctttgtgcagagcagctgtgtggagcccgagggcttcttggccatggcc
acagaacttccatacatggatttcttccgggaagatggtgactccttcatgaaagaagaa
tccctcttggataacctgatcaggctcttggcacacggttcccaggagagcatttgcagc
gtttatcaaattgatgcacagaatgatgtgggccttcagaaacctcacgaggaagaaatg
cccccttccttctttagtgaaaaggagagtccaactccatgcagagcggtgaggtcacta
atgaagatgaaggactttcagccgactgaagataagcagcagcagcagctgcccacttgc
cacaggcaggagccccccctttcgcagaagccatgtttctccatgtgccaggatggtact
ttggggccagaaattcctgatttgttactgtcgtttttgaatcaggaaggctatgaagat
ggcttcgggggcctgtacgaccctccattgtccttcctgaagacgtccatccatggcgat
gccacagaggaagagctgatggattacttggctcgagctcgggcagtggccagacaagcc
gacctgccctgggccacgacgcggctgtgctacctgctgggaagaatgagtctccgaagg
ttcaagctgtctcaggctcgggtgtattttgaagaagccctggcaaccctgcggggggat
tttcgtgacctccacttggtagccactctttacacccatctaacaggcatttacctgaaa
cagaagaacgtggagaaaagcgcttctttccttgacaaagctgcctccttgctgatgggc
ctggccagcgacacggatggtgcagagatggccctggagatcttgaaatacgccttgaaa
agagccgtgctcagccagagcagaaacgccgaggccagggcctgcttcctgctggcaaag
cattgcctgagtttcaagcaggggcaggaaccggcccccttcctggaaaggctgcagctg
ctgctgaatacgggccaggggttgcccagcggcagagggtccgtggactgctacttgaag
cttggccaactctacagccagaagtgcctgccccgccttgcgctcagctgcgccaaggtg
gtgttttcccacagctcctgttctctgctggagcagttcaggaccatcgatttggtgtta
aggaatgcctctaaagtccacagtcccacacctggtggacaaacacacccctccctcgtg
gccttttacctcagagaactgcttcacgcgctggaagggagcaggggcagccagaagctg
tgcagcgtcatttactatgaactttctcagctgcacagccgttacaagcagtacgaagaa
gccatcggctacatggaggaggttctagagctgaacacgagtgggcgagtggtggaagac
accattagccacttcattttcctcagctggctctacatcctccatcagcagactgacacg
gctctgtgcattttaaacgcagtcgcagagtccccctggagcacccgccagcagttgggt
gtcatccataacatggcagccatcagtctgagacagaggaatcagcccaggcgagccgtg
gagagctacttcaaagctctgagcatttccagagagacaggcagcgtggctaacgaggca
gtggctttggccaacctgggcatcttgtgcctgcactcgtctgcccaaagcctgggggag
catttcttgatcaaagccatccagctcttctccgaactctccagtggagaatgtgggggg
aacttcgtggccatcctcctccggctggggcaccactacacccgtggggctcagaaggag
aaggggaggaattgctatgagtgggcctttctggtggcgatggaacgcgaggatgtggaa
gggcaactccaggctgtccagcacctgtgtcatttccacagcacggttgtcccagatcca
gcgcagtgtgtcctctacaacgaatatcagctcaccctggttaggaagatgtccgacaag
gtcatggaagggcaggtgctagagaccatcagccatctctacctgtctctgggaacagaa
agggcatgccggtctgctctggactacctcaagaggagccttgggatattcattgatctt
caagccaaaaataaggaagctcaggcctggctccaggcaggaaggatctattatgcactg
cgggagaatgaattagttgacgtttatatccaggttgctcacaacgttgctctgagttct
caggaccccaatttagaaatggaaatgctcgaagcctcgggagacatatttttcaacgga
gactgggaaaaggaaaaagcagcgcccttctacagggacaaggctctgccacttgccacg
aaggccaaaaacggcagcgctgaacttcgcctcttcaacaagttggttgggttgttcttg
accttacagaagtatgaagaatgtctcggatacgcccagacgtcattaatgctcagtgtc
gatttaggagaccagctgagtgagcgagtggcctaccaccgcctggcggtcatccaccat
cacttggggcagtgtgaactggccgagcacttcttcctcaaagccgtttccctctgcccc
tccccactggagtttgacgaggaagccctctattatgtcaaagtgtaccttctcctggga
gacatcaccttctacgacctgaaggatccttttgatgctgcaggatactacaatctggca
ctggctgccgccatggatttggggaacaagaaagcgcaactgaagatttataccagactt
gccataatttaccacaatttccttatcgaccgagagatgtctctcttcttctatcagaaa
gccagagcctttgccacggagctaaatatttgcagaatcaacctctctccagaccagcct
cccaggagaaaagtcctgtga
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