Pituophis catenifer annectens (San Diego gophersnake): 139327204
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Entry
139327204 CDS
T11059
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcae04040
]
139327204
Ion channels [BR:
pcae04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
139327204
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
SieB
Motif
Other DBs
NCBI-GeneID:
139327204
NCBI-ProteinID:
XP_070813029
LinkDB
All DBs
Position
Unknown
AA seq
1968 aa
AA seq
DB search
MAHALLAQPGPDCFFRFTQESLAAIEQRITEEKAKQKVDQEQKEEDHDESKPKPNTDLEA
GKPLPFIYGDIPPHFVSEPLEDLDPYYANKKTFIVLNKGKNIFRFSATPALYMLSPFNTL
RRISIKILVHSYPSLFSIFIMFTILTNCVFMTLKDPPDWSKMVEYTFTGIYTFESLIKIF
ARGFCIDKFTFLRDPWNWLDFLVISFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLK
TIVGALIQSVKKLSDVMILTLFCLSVFALIGLQLFMGHLRHKCLFWPLSNTSYEDPHFKE
YYNGTELMWSKYIENKDHFYFLKDAKDALLCGNNSDAGQCPEGYTCVPIGRNPDYGYTSF
DSFSWAFLSLFRLMTQDYWENLYQQTLRAAGKGYMFFFVVVIFLGSFYLINLILAVVAMA
YDEQNQATIEEAQRKETEYQQMLEHLKRQQEEAQALVAAAAYKDFRDDGALGRLSETSSE
LSSSKSAKERRNRRKKRRQRELSVGEPGGNNKTFPKSESDSSIRRKGFRFSLEGNRLTYE
NRVISPYQSMLFPTRRNSRASFSSFKGPTAEGGSDADSEHSTFEENGSRNGSYFVVRRHS
DRRSSNISQTMFPMNGKMQSSVDCNGVVSLVGGPPVLLSPTGQLLPEVIIDKATTDDSTT
ASEVEGKKRRSSSFQISMDLLEDPTIRERAMSIASIITNTMEELEESRQKCPPCWYKFAD
SYLIWNCSDRWLQIKRIMHLIVMDPFVDLGITICIILNTLFMSMEHYPIEDSFSSVLKTG
NMVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDSIIVSLSLMELGLQDVDGLSVLRSFRL
LRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYDSCKCKI
SEDCKLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQPLCLTVFMMVMVIGNLVL
LNLFLALLLSSFSSDSLAAPEQETEANNLQIAISRIQRGINYIKRKICEFVQIVFLQRCK
EPSGLSAPDLQNNKKDQCIPNHTIVEINQTFGYQRPRMTTSCMDNTDHMSFINNPNLTVT
VPIAVGESDFEHFNTEELTSISELEETKEKTSLSSSTEGSTIIFASVADKESDAAAKGPP
QPKPCFTDGCVQKFRCCQINIESGKGKCWWNLRKTCFKIVEHNWFETFIVFMILLSSGAL
AFEDIYIEQRKTIKIVLEYADKVFTYIFILEMLLKWVAYGFQAYFTNAWCWLDFMIVDVS
LVSLIANALDYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSIMNVLLVCL
IFWLIFSIMGVNLFAGTFFECVNKTDGVRISHLIVPFKNVCETLDYARWKNVKVNFDNVG
AGYLSLLQVATFKGWMEIMYAAVDSTGIEKQPQYEHNLYMYLYFVGFIIFGSFFTLNLFI
GVIIDNFNQQKKKIRGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKIQGFVFDFVT
KQAFDIGIMILICLNMVTMMVETADQDPSVEEILYWINLIFIVIFTGECLLKLIALRYYY
FTIGWNIFDFVVVIFSIVGMCLSQIIEKFFVSPTLFRVVRLARIGRVLRLIKGAKGIRTL
LFALMMSLPALFNIGLLLFLVMFIYAIFGMSQFAYVKKESGIDDMFNFETFPNSMICLFQ
ITTSGGWNYLLFPILNKEPDCDPKKVHPGSSVEGDCGNPSVGIFFFVSYIIISFLVVVNM
YIAVILENFSVATEESAEPLGEDDFEMFYEVWEKFDPGATQFIEYSKLFDFAASLEPPLL
IPKPNKVQLIAMDLPIVSGDRIHCLDILFAFTKRVLGESDEMDALRVQMEDRFMAANPSK
VSYEPITTTLKRKLEEQSAKVIQRAFRHHRLRKPVFNTSYLYRDGDVFPPKTEMAFDKLS
LSLTLEKIERSSSTTSPPSYDSVTKPDKYEQEKSEKEEKGKDDKDYRK
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atggcacacgcactgcttgcacaaccaggacccgattgcttcttccgattcactcaggag
tcacttgcagcaattgagcaaaggatcaccgaggaaaaagccaaacaaaaagtagatcaa
gagcaaaaggaggaggaccatgatgaaagcaagccaaagccaaatactgacttggaagca
gggaagccgttgccttttatttatggagatattcctcctcacttcgtgtctgagcccttg
gaagacctggacccttattatgcaaataaaaaaacatttatagtattgaataaagggaag
aatatcttcagattcagtgccacacctgccttatacatgctgagtcctttcaataccctt
agaagaatttctataaaaattttagttcattcatatccttcattattcagcatctttatt
atgtttactattctcacaaactgtgtattcatgactttgaaagaccctcctgactggtca
aagatggtagaatacacattcactggaatatatacatttgaatccctcataaaaattttt
gcaagaggtttctgtatagataagtttacgttccttcgagatccttggaattggcttgat
tttcttgtaatttcatttgcatatgtgacagagtttgtggacctgggtaatgtctcagcg
ttgagaacattcagagttctccgggcattgaaaacaatatcagtcatcccaggcctgaag
acaattgtaggcgccctcattcagtcagtgaagaagctttcagatgttatgatcttgact
ctgttttgtctgagtgtgtttgcactaataggattgcagttgttcatggggcacttgagg
cataaatgcttgttttggcccctgagtaacacttcttatgaagatccacactttaaggaa
tactacaatggaactgagctcatgtggtctaaatatattgaaaataaagaccacttttac
ttcttgaaagatgcaaaggatgccttgctatgtggtaataactcagatgctgggcagtgt
ccagaaggatacacgtgtgtaccaattggtagaaacccggactatggctatacaagtttt
gatagctttagttgggctttcttgtcactctttcggctgatgactcaggattactgggaa
aacctttatcaacagacattgcgggctgctggcaaaggatacatgttctttttcgtcgtg
gtgattttcctgggctctttctaccttatcaacctgatcttggcagtagtagctatggcc
tacgatgagcaaaatcaagctactattgaggaagctcagcgaaaggagacagagtatcag
caaatgcttgagcatctgaaaaggcaacaagaggaagctcaggcactggtggcggcagcg
gcttataaagatttcagggacgatggtgctcttggaagactttccgaaacatcttcagaa
ttatcaagctccaaaagtgctaaagaaaggagaaaccgaaggaaaaaaagacggcaaaga
gaattgtctgtcggcgaacctggagggaacaacaaaacgtttccaaaatcagaatcagat
agtagcatccgaaggaaaggatttcgattttccttggaagggaatagactcacgtatgaa
aacagggtcatttctccataccagtcaatgctgtttcccacgaggcgcaatagccgggcc
agcttctccagcttcaaaggcccaaccgccgaaggaggctccgatgccgatagtgagcac
agcacctttgaagaaaacggaagccggaatggttcctattttgttgtacgcagacatagt
gaccgtcgcagcagcaacattagtcagaccatgtttccaatgaatgggaagatgcagagc
agtgtggactgcaatggggtggtttccttggtaggaggaccccctgtgctcctgtcgccc
acaggacagcttctcccagaggtgataatagataaagcaactaccgatgacagtactact
gcttctgaggtggaaggcaaaaagaggcggtccagttcttttcagatatcgatggatttg
ctggaagaccccaccataagggaaagagcaatgagtatagcaagcattatcacaaacacg
atggaagaacttgaagaatcaagacagaaatgtccaccatgctggtataaatttgccgac
agttacttgatttggaattgttctgataggtggttacaaataaagagaattatgcattta
attgtgatggatccatttgttgatcttggaattaccatctgcattattttaaatacacta
ttcatgagcatggaacattatccaattgaggactccttcagtagtgttcttaaaactgga
aatatggttttcactggaatcttcactgcagagatggtcctcaaaataattgccatggat
ccttattattatttccaagaaggctggaatatttttgatagcatcattgtatccctgagt
ttaatggagctgggtcttcaagatgtggacggattgtcagtcttaagatctttcagactg
cttcgagtgttcaaactggcaaagtcttggccaactctaaacatgctaataaagatcatt
gggaactcagttggagctttaggaaacttgaccttggtgctagctatcattgtcttcata
tttgctgtggttggtatgcagctgtttggtaaaaactatgacagttgtaaatgcaaaatt
tcagaagactgtaaacttccacgctggcacatgaatgactttttccactcattcttgatc
gtgttccgagttctttgtggagaatggatagaaaccatgtgggactgtatggaggttgca
ggtcaacccctttgcctgaccgtttttatgatggtgatggtgattggaaacctggtgctt
ctaaacctcttcctggcattattattgagttctttcagttcagacagccttgctgctcca
gagcaggaaactgaagcaaataatctacagattgctatatcaagaattcagaggggaata
aattacataaagaggaagatatgtgaatttgtgcaaattgtttttttgcaaagatgcaag
gaaccttctggattaagtgcacctgatctacaaaacaataagaaagatcagtgcattccc
aaccacaccatagtggagatcaaccaaacttttggttatcagaggcctagaatgactacc
agctgcatggacaacactgatcacatgtcattcataaacaacccaaatcttactgtgact
gtgccgatagcagtgggagagtctgattttgaacatttcaacacagaagaacttaccagc
atatctgaacttgaagaaaccaaagaaaaaacaagtctatccagctccactgaaggtagc
acaattattttcgcatctgtggcggacaaagaatctgatgctgcagcaaaaggcccacca
caaccaaaaccttgttttactgatggctgtgtacagaaattcagatgttgtcagatcaat
atagagtctgggaaaggcaaatgctggtggaaccttcgcaaaacttgctttaagatagtg
gaacacaattggtttgaaaccttcattgtcttcatgattcttctaagcagtggtgctttg
gctttcgaagacatatacattgagcagcgcaagactatcaagatcgtactggaatacgca
gacaaggtcttcacctacatctttattttagaaatgcttctaaagtgggtggcttatggc
tttcaagcctatttcaccaatgcctggtgctggctggatttcatgattgtagatgtttcc
ttagtcagtttaattgccaacgccttggactattcggaacttggccctattaaatcgctt
cgcactctgagagctttgagacctttaagggccttatcccgcttcgaaggaatgagggtg
gtggtcaatgccctgataggagccataccctcaattatgaatgtgcttcttgtttgtctt
atattctggctaattttcagcatcatgggtgtaaacctgtttgctggtacattctttgaa
tgtgttaataaaacagatggagtaaggatttctcatttaatcgttccatttaaaaatgtc
tgcgagactttagactatgccagatggaaaaatgttaaagtcaactttgacaacgttgga
gctggatatctctctcttcttcaagttgctacctttaaaggatggatggaaataatgtat
gctgctgttgattcaacaggaatagaaaagcaaccccagtatgagcataacctgtatatg
tatctttactttgtcggcttcattatatttggttcattcttcactttgaatctgttcatt
ggcgtcatcattgataatttcaaccaacagaaaaagaagataagagggcaagatattttt
atgacagaagaacagaaaaaatattataatgccatgaaaaaattgggatcaaaaaaacca
cagaaacctatacccaggccttcaaataaaatacaaggcttcgtttttgattttgtaacc
aaacaagcctttgacatcggcatcatgattcttatctgccttaacatggttaccatgatg
gtggaaacagctgaccaggatccttctgtagaagagattttatattggattaatttgatt
ttcattgtcatttttactggggagtgtctcctgaaattgattgctctccgttactattat
ttcactattggctggaatatatttgattttgtggttgtcatattctccattgtaggtatg
tgcctgtcacagatcattgagaaattctttgtatcccccactttgtttcgagtggtccga
cttgccaggataggtcgagtcctgcgtctaatcaagggggcaaaagggatccgcactctg
ctttttgccttgatgatgtctctccctgccttgtttaatattggtctcctccttttcctg
gtcatgttcatctacgccatatttggaatgtcccaatttgcctacgttaaaaaggaatct
gggattgacgacatgttcaattttgaaacttttcctaacagtatgatctgccttttccaa
ataaccacatccggtggttggaattatctgctgtttcccattctcaacaaggagccagac
tgtgaccctaaaaaagttcatccgggaagctcagttgaaggagattgtggcaatccttcg
gttgggattttcttctttgtcagctacattatcatctcgtttttagttgtagtcaatatg
tacattgctgtcattttggagaacttcagtgtggctaccgaagaaagtgctgaaccgcta
ggggaagatgattttgagatgttctacgaggtctgggaaaaatttgatccaggtgcaaca
cagtttatagagtacagcaagctctttgattttgctgcctcgctagagccccctctgcta
ataccaaaaccaaacaaagttcagctaattgcaatggacctgcccattgtgagtggcgac
aggattcactgtcttgatatcttatttgcctttacaaagcgtgttttgggtgaaagcgat
gaaatggacgccctccgtgtgcaaatggaagaccggtttatggctgccaatccctcaaaa
gtctcctatgaaccaattacaaccaccctgaaaaggaaacttgaggagcaatcggctaag
gttattcagagagcctttaggcatcatcgcctgaggaaaccagtgttcaatacgtcatac
ttatacagggatggggatgtttttcctcccaaaacagaaatggcttttgataaattaagt
ttgagcttaactctggaaaagatagaaagaagctcctccacaacgtcacctccttcctat
gatagtgtaacaaaaccagacaaatatgaacaagaaaagtcagaaaaagaagaaaaaggt
aaagatgacaaggattatagaaagtaa
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