Pituophis catenifer annectens (San Diego gophersnake): 139327210
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Entry
139327210 CDS
T11059
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcae04040
]
139327210
Ion channels [BR:
pcae04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
139327210
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
HB_ELP1
IQ
Neur_chan_memb
ATP-synt_B
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
139327210
NCBI-ProteinID:
XP_070813039
LinkDB
All DBs
Position
Unknown
AA seq
1954 aa
AA seq
DB search
MAQSVLVPPGPDSFHYFTKESLAAIEQRIAEEKAKKSKQERKDVDDDENGPKPNSDLEAG
KSLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNRGKAIFRFSATSAVYLLTPFNPLR
KIAIKILVHSLFSMLIMCTILTNCVFMTMSNPPEWTKNVEYTFTGIYTFESLIKILARGF
CLEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVG
ALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLIWPPDNSTFEINITSYFNST
MGENGTFVNTTVTTFNWEDYVSDDSHFYFLEGQNDALLCGNGSDAGQCPEGYMCVKAGRN
PNYGYTSFDTFSWAFLSLFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINL
ILAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAALAAAAGESREFSEVG
GVGGFSESSSATSKLSSKSAKERKNRRKKRKQREQSEGDEKDEDEFHKSESEDSIRRKGF
RFSIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRSSKTSLFSFRGRAKDLGSENDFADDE
HSTFEDNESRRDSLFVPHRHSERRNSTISQASRSSRVMSILPANGKMHSTVDCNGVVSLV
GGPPPLMSPTGQLLPEGTTTETELRKRRSSSYHMSMDFLSDPTARQRAMSIASILTNTME
ELEESRQKCPPCWYKFANMCLIWDCWTPWLKIKHIVNLIVMDPFVDLAITICIVLNTLFM
AMEHYPMTQQFNNVLSVGNLVFTGIFTAEMFLKIIAKDPYYYFQEGWNIFDGIIVSLSLM
ELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFA
VVGMQLFGKNYKECVCKISNDCELPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQ
PMCLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKGIDF
IKRKAHEFVQKAFVRKQKALDEIKPLEDLNNKKDSCISNHVIVDIGKDFNYLKDGNGTTS
GIGSSVEKYIIDESDYMSFINNPSVTVTVPIAVGESDFENLNTEEFSSESDLEESKEKLN
ASSSSEGSTVDVGVPQVGEQPEAEPEESLEPEACFTEGCIRKFKCCQVSVEDGKGKLWWN
LRKTCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTVLEYADKVFTYIFILE
MLLKWVAYGFQVYFTNAWCWLDFLIVDVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVN
LFAGKFYHCVNTTTGEMFSTDEVDNQTECENLIERNETARWKNVKVNFDNVGLGYLSLLQ
VATFKGWMDIMYAAVDSRNVEQQPHYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFN
QQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQAFDISI
MILICLNMVTMMVETDDQTDAMETILYRINFIFIVLFTGECVLKLISLRYYYFTIGWNIF
DFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSL
PALFNIGLLLFLVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWD
GLLAPILNSGPPDCDPEIDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILE
NFSVATEESAEPLSEDDFEMFYEVWEKFDPDATQFIEFAKLSAFAASLDPPLLIPKPNKV
QLIAMDLPMVSGDRIHCLDILFAFTKRVLGESDEMDALRIQMEDRFMAANPSKASYEPIT
TTLKRKQEEVSAVIIQRAVRRFLLRLKVKKVSFIKEDMIIDKLNENSTPEKNDMTPSTTS
PPSYDSVTKPDKDKYEKDKSEKEDRGKDVRDYKK
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcagtgctggtaccaccaggacctgacagcttccactattttacgaaagaa
tcactggcagctattgaacaacgcattgccgaggaaaaggcgaagaagtccaagcaagag
cgcaaagatgtcgatgatgatgaaaatggaccaaaaccaaatagcgatttggaagctggc
aaatccctgccctttatatatggagacatacctccggggatggtgtctgagccattggag
gacctggacccatattacattaacaaaaaaacatttatagtattgaatagagggaaggca
atattccgattcagtgccacatctgctgtgtacctgttaactcctttcaaccctcttaga
aaaatagctatcaagattttggtacattcattattcagcatgcttattatgtgcactatt
ttaaccaactgtgtatttatgaccatgagtaatcctccagaatggacgaagaatgtagaa
tacacgttcactggaatttatacctttgaatcactaataaaaattcttgcaaggggcttc
tgtttagaagatttcacgttcctccgggatccctggaattggttggatttcacagttata
acattcgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattc
agagttctccgggcattgaaaacaatatcagtcattccaggcctgaagacaattgtaggg
gccctcattcaatctgtgaagaagctctcagatgtcatgatcttgaccgtgttttgtctg
agtgtatttgcactaatagggctccaacttttcatggggaacttgaggcataaatgcctg
atttggccaccggacaattctacttttgaaataaacatcacttcctatttcaatagcaca
atgggagaaaatggtacctttgtaaatacgacagtgaccacttttaactgggaagattat
gtcagtgatgacagtcatttttacttcttggaaggacaaaatgatgctttgctgtgtggc
aatggttcagatgcaggtcaatgtccagaaggatatatgtgtgtaaaagctggtagaaac
cccaactatggctatacaagttttgataccttcagctgggccttcttgtcactctttcgg
ctgatgactcaggactactgggaaaatctttaccaactgactctacgtgctgctggcaaa
acatacatgatcttttttgtcctggtgattttcttgggttctttctacctgatcaacttg
atcctggctgttgttgccatggcttatgaagagcagaatcaagctaccatggaagaagct
gagcagaaagaggcagagttccagcagatgctggaacagctgaaaaaacagcaagaagag
gctcaggcagcagctttagccgcagcagcaggtgaatcaagagaatttagtgaagttggt
ggtgtaggtggattctcagagagttcttcagcaacatcaaagttgagttccaagagtgct
aaggagaggaagaacaggcggaaaaagagaaaacagagagaacagtctgaaggagatgaa
aaagatgaggatgaatttcacaaatcagaatcagaggacagcatccgcagaaaaggcttt
cgattctctattgaagggaacagattaacctatgaaaaaagattttcttccccacaccag
tctttgctgagcatccgcggatcgctgttttctcccaggcgtagcagcaaaacgagtctc
ttcagcttcagaggccgagcaaaggatcttggatcagagaatgattttgctgatgatgag
cacagcacttttgaagacaacgagagtaggagagattccctctttgttcctcaccggcac
agtgagcgtcgcaacagtaccatcagtcaggccagccgatcatctagggtgatgtctatc
cttccagcaaatgggaagatgcacagcactgtggactgcaatggggtggtttccttagtt
ggcgggcctcctcctcttatgtcacccactgggcagcttcttcctgagggtaccactaca
gaaacagaactaagaaaaagacgctccagttcctaccacatgtcaatggattttctctct
gatcctactgcaaggcaaagagcaatgagtatagctagtatacttaccaatacaatggaa
gaacttgaggaatccaggcagaagtgccctccctgctggtacaaatttgctaacatgtgc
ttaatctgggattgctggactccttggctgaaaataaagcatattgtaaatttgattgtg
atggatccatttgttgaccttgctattaccatctgcattgttttaaataccttgtttatg
gcaatggaacattacccaatgactcaacagtttaataatgtactgtccgttggaaacttg
gtgtttactggcatcttcacagcagaaatgtttctcaaaataattgccaaggatccttat
tattatttccaagaaggctggaatatttttgatggcatcatagtcagcctgagtttgatg
gagttgggtcttgcaaatgtggaaggattatcagttctaagatccttcagattgcttcga
gttttcaaactggcaaaatcttggccaacattaaacatgttgataaagattattggcaat
tcagtcggtgccttgggaaatttgactttggttttggctatcattgtcttcatttttgct
gtagttggaatgcaattgtttggcaaaaactacaaggaatgtgtctgcaagatttccaat
gactgtgaactcccacgctggcacatgaatgatttttttcattctttcttgattgtcttt
cgagttctttgtggagaatggatagagactatgtgggattgtatggaggttgctggacaa
cccatgtgccttactgtcttcatgatggtcatggtgattggtaatttagtggttttgaat
ctttttctggccttgctcctgagctccttcagttcagacaatcttgctgctacagatgat
gataatgaaatgaacaacctccaaattgcagtggctaggattcagaaaggaatagatttt
ataaaaagaaaagctcatgaatttgtacaaaaggcgtttgtgagaaaacaaaaggctttg
gatgaaatcaagccccttgaagatctaaacaacaagaaagacagttgcatttctaatcat
gtgatagtagatattggcaaagattttaactatctcaaagatggcaatgggactaccagc
ggcataggaagcagcgtggaaaaatacatcattgatgaaagtgattatatgtcattcata
aataacccaagtgtaactgtgacagtacccattgctgttggagaatcagattttgaaaat
ttaaatacagaggagtttagcagtgagtcagatctggaagaaagcaaagagaaactaaat
gcatctagttcatctgaaggtagtacagttgatgttggagttccccaagttggagaacaa
cctgaagctgaacctgaagaatctcttgaaccagaagcctgttttacagaaggctgcatc
cggaaattcaagtgctgccaagtcagtgtagaagatgggaaaggaaaactgtggtggaat
cttcggaagacttgttacaaaatcgtagaacataattggtttgagacttttattgtcttc
atgattctccttagcagtggtgctctggctttcgaagacatatacattgagcagcgcaag
actatcaagaccgtactggaatacgcagacaaggtcttcacctacatctttattttagaa
atgcttctgaaatgggtggcttatggctttcaagtctattttacaaatgcctggtgctgg
ctggatttcctcattgttgatgtagtagtgaatgctctcttgggagcaattccatctatc
atgaacgtgcttcttgtatgtcttatattctggctaatctttagcattatgggagtgaat
ctgtttgctggcaagttctaccactgtgttaacaccacaactggggaaatgttcagcact
gacgaagttgataatcagaccgagtgtgagaatctcattgaaagaaatgaaacagccaga
tggaaaaatgtaaaagtcaacttcgataatgtgggacttggctacctctctctgcttcaa
gtagccaccttcaaaggctggatggacatcatgtatgcagctgtagattcacgaaacgtg
gaacaacagccacattatgaggataacctttatatgtatctttattttgtcatctttatt
atctttggatccttcttcactttgaatttatttattggtgtcatcatagataatttcaat
cagcaaaaaaagaagtttggaggtcaagacatctttatgacagaagaacagaaaaaatac
tataatgcaatgaaaaaactgggctccaagaaaccacagaaacctatacccaggccagca
aacaaatttcaaggcatggtctttgattttgtaacaaaacaagccttcgacatcagcatc
atgattcttatctgccttaacatggttaccatgatggtagaaactgatgaccaaactgat
gcaatggaaactattttgtatcgaattaattttatcttcatcgtccttttcactggagaa
tgtgtcttgaaactgatttcactccgctattattattttacaattggctggaatattttt
gattttgtggttgtcatcttatctattgtaggtatgttcctggcagagattattgagaaa
tattttgtgtcccccaccttgttccgagtaatccgacttgcccggataggtcgaatcctg
cgtctaatcaagggagcaaaggggatccgcactctgctttttgccttgatgatgtctctc
cctgccttgttcaacatcggtctcctgcttttcctggtcatgttcatctacgccatattt
ggaatgtccaattttgcctacgtgaagagagaagttggcattgatgacatgttcaacttt
gaaacttttggcaacagcatgatctgccttttccaaattaccacctctgctggctgggat
ggcttgctagcccccatcctgaacagcgggcctccagattgtgaccctgagatagaccat
ccaggtagctcagtcaagggagactgtggcaacccttcggttgggattttcttctttgtc
agctacataatcatctcatttttagttgtagtaaacatgtacattgctgtcattttggag
aacttcagcgtcgctaccgaagaaagtgctgaacctctgagtgaggatgattttgagatg
ttctatgaagtctgggaaaagtttgatccagatgcaacccaattcatagagtttgccaaa
ctctctgcttttgcagcctctttggatcctcctcttctaataccaaaaccaaacaaagtt
cagcttattgcgatggacctgcccatggtgagtggtgatagaattcactgccttgacatc
ttatttgctttcaccaaacgtgtcttgggtgaaagtgatgaaatggacgccctccgtatt
caaatggaagaccggtttatggctgccaacccttcaaaagcctcttatgaaccaatcacc
accacattgaaacgaaaacaagaggaagtatccgctgttattattcagcgagccgttagg
cgcttcctcttaaggctaaaagttaagaaagtttcctttatcaaagaagatatgatcatt
gataagctaaatgagaattctacccctgaaaaaaacgatatgaccccctccaccacctct
ccaccttcctacgatagcgttacaaagcccgacaaagataaatacgagaaagacaaatca
gaaaaagaagatagaggtaaagatgtcagggactataaaaaatga
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integrated database retrieval system
