Pituophis catenifer annectens (San Diego gophersnake): 139327211
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Entry
139327211 CDS
T11059
Name
(RefSeq) sodium channel protein type 3 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcae04040
]
139327211
Ion channels [BR:
pcae04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
139327211
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
IQCJ-SCHIP1
Motif
Other DBs
NCBI-GeneID:
139327211
NCBI-ProteinID:
XP_070813049
LinkDB
All DBs
Position
Unknown
AA seq
2010 aa
AA seq
DB search
MAQTLLVPPGPDSFRFFTRESLAAIEKRCAEEKAKRPKQEHTDNDDENGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYSNKKTFIVLNRGKAIFRFSATSALYILTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPEWTKNVEYTFTGIYTFESLTKILARGFC
LEGFTFLRDPWNWLDFSVILMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLLWPLDNSTFDGNITSHFNSTE
GDNDTFVNMTVTTFNWEEYIEDESKDALTYHFYVLEGQRDALLCGNSSDAGQCPEGYVCI
KAGRNPNYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSF
YLINLILAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQTTAAVAAASVASR
DFSGVGGLGELLESSSEASKLSSKSAKDRRNKRKKRKQKELSEAEDKEEVERFPKSESED
SIRRGGRLSYEKRTSTHQVSLLSFRGSLFSPRRNSRTSIFSFRGRAKDIGSENDFADDEH
STLEDNESRRDSLFVPNRQTSERRNSTTSQMSLSSKMVPALPANGKMHSTVDCNGVVSLM
GGPPALPSPTGQFLPEGTTTETEIRKRRLSSYQISMELMEESAARQRAMSIASILTNTME
ELEESRQKCPPCWYRFANVFLIWDCWSPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFM
AMEHYPMTSDFYQVLSVGNLVFTGIFTAEMILKIIARDPYYYFQEGWNIFDGIIVSLSLM
ELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFA
VVGMQLFGKSYKECVCKIAEDCELPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQ
TMCLIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNETNNLQIAVARIQKGIDY
IKKKLGEIVQKSTVRKQKSIDDIKVLEELNHKKDLYISNHTMIEITKDVNYLRDGNGTTS
GLGTGSSVEKYIIDENDYMSFINNPGLTVTVPIAVGESDFENINTEEFSSESDLEGSKEK
INATSSSEGSTVDVALPGEGEQAEIEPEEALEPEACFTEGCIQKFPCCQVSIEDGKGKIW
WNFRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYSDKVFTYIFI
LEMLLKWVAYGFQIYFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALRPL
RALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGEM
FNISDVNNKTECEELIHNNQQARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDS
RDVEEQPYYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQ
KKYYNAMKKLGSKKPQKPIPRPGNKFQGLVFDFVTKQAFDISIMILICLNMVTMMVETDD
QSKEMEIILSRINLVFIILFTGECILKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAEI
IEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIY
AIFGMSNFAYVKREVGIDDLFNFETFGNSMLCLFQITTSAGWDGLLAPILNSGPPDCDPE
IDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDD
FEMFYEVWEKFDPDASQFIEYSKLSDFAASLDPPLLIAKPNNVQLISMDLPMVSGDRIHC
LDILFAFTKRVLGESEEMDLLRVQMEDRFMAANPSKVSYEPITTTLKRKQEEVSATIIQR
AFRRFLLKQKVKKVTSMYNKEKCRDGDVLPIKDGTSDRFNGNSSPEKTDESSSTTSPPSY
DSVTKPNKEKYEKGKTDRDLKGKDIKISKK
NT seq
6033 nt
NT seq
+upstream
nt +downstream
nt
atggcacagacactgctggtaccaccaggacctgacagtttccgcttttttactagagaa
tctcttgcagctattgaaaaacggtgcgcagaagagaaagcgaaaaggcccaaacaagaa
catacggataatgatgacgaaaatgggccaaaaccaaatagtgacttggaagcaggaaaa
acacttccctttatatatggcgatattcctcctggaatggtgtcggaaccattggaggac
ctggacccttactatagcaataaaaaaaccttcattgtgttgaatagagggaaggcaatt
ttccgattcagtgccacatctgccttgtacattttaacccctttcaatcctctcagaaaa
attgctattaaaattttggtacattcattattcagcatgcttattatgtgcactattttg
accaactgtgtatttatgaccatgagtaatcctccagaatggacaaagaatgtagagtac
acattcactggaatttatacttttgaatcacttacaaaaatccttgcaaggggcttttgt
ttagaaggatttacttttcttcgagatccctggaactggcttgacttcagtgtcattttg
atggcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtattgagagctttgaaaactatttctgtaattccaggcctgaagacaattgtaggggcc
ctcattcaatctgtgaagaagctctcagatgtcatgatcctgaccgtgttttgtctgagt
gtatttgcactaatagggctccaacttttcatgggaaacctgaggcataaatgcttgctg
tggccattggacaattctacttttgatggaaacatcacttcccacttcaatagcacagag
ggagacaatgatacatttgtaaatatgacagtgaccacttttaactgggaggagtacatt
gaggatgaaagtaaggatgctttaacatatcatttttatgttttggaaggacagcgagat
gcacttctttgtggtaatagctcagatgctggccaatgcccagaaggatacgtgtgtata
aaagctggtagaaaccccaactacggctacacaagctttgacaccttcagctgggccttt
ctatcactctttcggctgatgactcaggacttctgggaaaatctttaccaactgacgcta
cgtgctgcaggcaaaacatacatgatcttttttgtcctggtgattttcttgggttctttc
tacctgatcaacttgatcctggctgttgttgccatggcttatgaagagcagaatcaagcc
accatggaagaagctgagcagaaagaggcagagttccagcagatgctggaacagctgaaa
aaacagcaagaagaggctcagacaacagcagctgtggcagcagcatcagttgcatcaaga
gatttcagcggcgtgggtggattgggggagctcttggaaagttcttcagaggcatctaaa
ttaagctcaaagagtgctaaagacagaaggaacaaaaggaaaaaaaggaagcagaaggag
ctctcggaagcagaagataaggaagaagtggagaggtttcctaaatctgaatcggaagac
agcatcaggaggggaggtcgcttatcctatgaaaagagaacctcaactcaccaggtttct
ttgctgagctttcgcggctccctgttctccccacggcgcaacagcagaacaagtattttc
agcttccgaggaagagcgaaagatattgggtcagagaatgactttgctgatgatgaacat
agtactcttgaagacaatgagagcaggagagattctctctttgttccaaacagacaaaca
agtgagcgtcgcaacagtactaccagtcaaatgagcctgtcatcaaagatggtaccagcg
cttcctgcaaacgggaagatgcacagcacagtggattgcaatggtgttgtttccttaatg
ggaggacctcctgcactcccttcacctactggacaatttttaccagagggtacaacaact
gaaacagaaataagaaaaagaagattaagctcttatcaaatttctatggaactgatggaa
gaatctgcagcaaggcagagagccatgagtatagccagtatccttacaaatactatggaa
gaacttgaagaatctcggcaaaagtgtccaccgtgctggtatagatttgcaaatgttttc
ttgatctgggattgctggagcccttggttaaaagtaaagcacattgtgaatttgatagtg
atggatccatttgtcgatcttgccattactatttgcatagttttgaatacactgtttatg
gccatggaacattatccaatgacttctgatttctaccaagtactttcagtgggaaacctg
gttttcactggaatcttcactgcagagatgatcctcaaaataattgccagggatccttat
tattatttccaagaaggctggaatatttttgatggcatcatagtcagcctgagtttgatg
gagttgggtcttgcaaatgtggaagggttatcagttctaagatccttcagattgcttcgt
gttttcaaattagcaaaatcctggccaacgttaaatatgctgatcaaaattattggcaac
tctgttggtgctttgggaaatctgactttggtcctggccatcattgtcttcatttttgct
gtggttggtatgcagctctttggtaaaagctacaaagaatgtgtgtgcaagatcgcagaa
gactgtgaactccctcgctggcacatgaatgattttttccactctttcttgatcgtgttc
cgagttctttgcggagaatggatagaaaccatgtgggactgtatggaggttgcgggccaa
accatgtgccttattgttttcatgttggtcatggtgattggaaatttagtggtattaaac
ctgtttctggccttgctcctgagctccttcagttcagacaatcttgctgctactgatgat
gataatgagacgaacaatctccagattgctgtggcgaggattcagaagggaatagattac
attaagaaaaaattgggagaaattgtccaaaaaagcacagttagaaagcagaaatctata
gatgatatcaaagtccttgaagaactaaaccacaagaaagatctctacatttccaaccat
accatgattgaaataactaaggatgttaattatctgagagatggaaatggaacgaccagt
ggtttaggaacaggcagcagtgtggaaaaatatattattgatgaaaatgattacatgtca
tttatcaacaatccaggccttactgtaactgtaccaattgcagttggagagtcagatttt
gaaaatataaacacagaagaatttagcagtgaatctgacctggaaggaagcaaagagaag
ataaatgccaccagctcatctgaaggcagtactgtggatgtggccctgccaggagagggg
gagcaggcagagattgaacccgaagaggctcttgagcctgaagcctgtttcacggaaggc
tgcatccaaaagttcccatgttgtcaagtgagtatagaagatggcaaaggaaaaatctgg
tggaattttagaaaaacctgctacagcattgttgaacataactggtttgaaacattcatt
gtatttatgattctcctcagcagtggtgctctggcctttgaagacatatatattgaacag
cgtaagactatcaagacaatgctggaatattcagacaaggtcttcacgtacattttcatt
ctggaaatgcttttgaaatgggtggcctatggcttccaaatttatttcacaaatgcctgg
tgttggctggatttcttaattgttgatgtttcattggtcagtttaatagccaatgcacta
ggctattctgaattaggggccattaaatcacttcgaacactaagagcattgaggccttta
agagctctgtcacgttttgaaggaatgagggtggttgttaatgcccttgttggagcaatt
ccctccattatgaatgtgcttctggtttgtctcatattttggctgatctttagtattatg
ggtgtgaatctctttgctggcaagttctaccattgcgttaataccacaacgggtgaaatg
ttcaacatcagtgatgtcaacaataaaacggaatgcgaagagctaatacacaacaatcag
caagcccgatggaaaaatgtgaaagttaactttgataacgttggggctggatatcttgct
ctgcttcaagttgctacttttaaaggatggatggatattatgtatgcagctgttgattca
cgggatgtagaagaacaaccctattatgaggataacctatatatgtatctttattttgtt
atcttcatcatctttggatcattttttaccttaaacctcttcattggtgtcattatagat
aatttcaatcagcaaaaaaagaagtttggaggacaagacatttttatgacagaggaacag
aaaaaatattacaatgcaatgaaaaagctgggttccaaaaaaccacaaaagccaatacca
agaccagggaataaatttcaaggattagtctttgactttgtaaccaaacaagcctttgac
atcagtatcatgattcttatttgccttaatatggtcaccatgatggttgaaacagatgac
caaagtaaagaaatggaaattattttatccaggattaacttggtattcataattcttttc
actggagaatgtatactcaaactgatttcacttcgtcattattattttaccattggctgg
aatatttttgattttgtcgttgtcattctctccattgtaggaatgttcctcgcagagatt
attgagaaatattttgtgtcacctaccctgttcagagtgatccgacttgcccggataggt
cgaatcctgcgtctaatcaagggagcaaaagggatccgcactctgctttttgccttgatg
atgtctctccctgccttgttcaacatcggcctcctgcttttcctggtcatgttcatctac
gccatatttggaatgtccaactttgcctatgtgaaaagagaagttggtattgatgacttg
ttcaattttgaaacttttggcaacagcatgctctgtctttttcagatcaccacctctgct
ggctgggatggcttgctagcccccatcctgaacagcgggcctccagattgtgaccctgag
atagaccatccaggtagctcagtcaagggagactgtggcaacccttcggttgggattttc
ttctttgtcagctacataatcatctcatttttagttgtagtaaacatgtacattgctgtc
attttggagaacttcagtgtcgctaccgaagaaagtgctgaacctctgagtgaggatgat
tttgagatgttctatgaagtctgggaaaagttcgatccagatgcatcccaatttatagaa
tatagtaaactttctgattttgctgcttcgttggatcctcctcttctgattgccaaacca
aacaatgttcagctaatttcgatggacctgcccatggtgagtggcgatagaattcactgc
cttgacatcttgtttgcctttacaaagcgtgtcttgggagaaagcgaagaaatggattta
ctcagagtgcaaatggaagaccgcttcatggcagccaacccatccaaagtttcatacgaa
ccaatcaccaccacattaaagcgcaagcaggaggaggtgtccgccaccatcatccagcgg
gctttcaggcgtttcctcctaaaacagaaagttaaaaaagtaacttctatgtataataaa
gaaaaatgcagagatggcgacgtcctaccaatcaaagacgggacctctgataggtttaat
gggaattccagtccagagaaaaccgatgagagctcctcgaccacttctcccccttcctat
gatagtgttactaagccaaacaaagagaaatatgaaaagggcaaaacagacagagacctt
aaagggaaagatataaagattagcaaaaagtaa
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