Parageobacillus caldoxylosilyticus: BV455_02858
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Entry
BV455_02858 CDS
T07489
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
pcal
Parageobacillus caldoxylosilyticus
Pathway
pcal02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pcal00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BV455_02858 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcal03021
]
BV455_02858 (sigA)
Transcription machinery [BR:
pcal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BV455_02858 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
DUF2408
HTH_20
DUF2316
Motif
Other DBs
NCBI-ProteinID:
QXJ39492
LinkDB
All DBs
Position
2773572..2774699
Genome browser
AA seq
375 aa
AA seq
DB search
MAEKPARSKQADADATLEQVKEQLTELGKKRGILTYEEIAERLSGFDLDSDQMDEYYEYL
ADQGIEVISESDLEADPDIDDLAKEEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVPLLS
AEEEIELAKRIEQGDEEAKRRLTEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVE
KFDYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRE
PTPEEIAEEMDLTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPSEHAAY
ELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRK
LRHPSRSKRLKDFLE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaaccagcccgttctaaacaagccgatgcggatgcaactcttgagcaagta
aaagaacagctaacagagctcggcaaaaagcgcggtattttaacatatgaagaaatcgct
gagcgcttgtctggctttgatctagattctgatcagatggatgaatattacgaatatctg
gctgatcaaggaatcgaggtcattagcgaatctgatttagaagcagatcctgatatcgat
gacttagcaaaagaagaagaagaatttgatttaaatgatttatccgttcctcctggcgtt
aaaattaacgaccctgtacgcatgtatttaaaagaaattggccgcgttccgcttttgtct
gccgaagaagagatcgagctggcaaaacggattgaacaaggcgacgaggaagcaaagcgc
cgcttgacagaagctaacctgcgccttgttgtcagcatcgccaaacgttacgttggccgc
gggatgctgtttctcgatttaatccaagaaggaaacatggggctaattaaagccgtcgaa
aaatttgattatcgtaaaggatataaattcagcacttatgcaacatggtggattcgccaa
gcgattacgcgcgccattgccgatcaggcacggacgatccgcatcccggtgcatatggtt
gaaacgattaacaaactgatccgcgtgcagcggcaattgcttcaagatcttggtcgtgaa
ccaactccggaagaaattgctgaggaaatggatttgactccggaaaaagtacgcgaaatt
ttaaaaattgcccaagaaccggtgtctctcgaaacaccgattggcgaagaagacgattcg
catttaggcgatttcattgaggatcaggaagcaacatctccatccgagcacgcggcgtat
gagctgctaaaagaacagctcgaagacgtgttagatacgcttactgaccgcgaggagaac
gttttgcgcttgcgttttgggctagatgacggccgaacacggactctggaagaagttgga
aaagtatttggcgtcacccgcgaacgcattcggcaaattgaagcaaaagcgctccgcaag
ttgcgtcatccaagccgcagcaaacggctgaaagactttttagagtaa
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