Pomacea canaliculata (golden apple snail): 112554506
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Entry
112554506 CDS
T05881
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112554506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112554506
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
112554506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_14
TPR_17
TPR_11
TPR_2
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_19
TPR_12
TPR_6
TPR_9
TPR_7
TPR_15
ChAPs
ARM_TT21_C
TPR_COPA_B
DUF7017
BTAD
FAT
Motif
Other DBs
NCBI-GeneID:
112554506
NCBI-ProteinID:
XP_025078075
LinkDB
All DBs
Position
LG13:complement(18642345..18665013)
Genome browser
AA seq
1443 aa
AA seq
DB search
MSFLNKGALKAAREAIKNKDFKETIKLCKIILGEDKNNYNALVFVGVAAEGLEQYDQALK
AYRRAVEICPEQILAWQGLSSLYAKNPGIIGQEEIIGVYEKLVDLYSNEKEKRHDAVLKL
ISLWKDSDLEKALSMYQTLMKELDPGTKRTETIQQMVILLKSQQLLTPDQQELLLSGLQE
LLHADNIDASDTELEELTNNYLKLVRKNKQEQLDSECSQLIKHFPTLSAPREVKLLLLLD
QQMGKVQKDNEKTKKMEEIEDLISTLTEQRKSLNSAELILAQGYLALNKDSATIALDYLK
KGVNVKPDLFCGHFYLAQCLHKLHEDVSCLKTCNDALTLLSKKSRIVTTNINDAVQHLFL
LAAHCCYQQGTKYSLAQSLEYLDKLTEDTEETLVLRAYIMLSLGDSDELKACIEKLETSN
STEVRALQSWIAFKNKEYTAAVTGLEKCVAEDPNNALYLLRLGCALWELRNTSQTDRLQD
RCFNLLLKAAKLDPYQSHTFLYLGHFYRELKNDQQRARKCYQKAFALNSNNEEAGAALCD
MMAESGEEDNVKTLLENVTATAAAGCSKWAWLRLGLSQVRTGDSTNAIASFQSALRADPS
DEHVWECLAEAYLHRGSYTAALKAFTKAAELHPDSTYSLCQIASIKQQLGXLTEAADEYK
LVLSKSSHYVPALKGLGETYLLMSRRFLDQCLTGLALDHCQQAITCLTRAATQRPDLSCL
WKLLGDCCTLLQGVNSRTFSICVPRRLCQATSADDKDVISIGKLEMLELATKCYGKALKI
LPENSSLWHDFGISFYYQCCQLKSSSEAKLLVEKSISVLKKAVSLEPTDPTHWTALGVVA
ASRYAKNYSLAQHCFIKSIECESNNAVAWTNLGTVYLQNDNFKLAHEAFKVAQNQNPEYI
TSWIGQGLIGEIVAHEDAMDLFRHTTDIGVHMESCIGYGHWVITTLLDVTNQHTPAFQYC
IKQMAAIPVAVTALTRFTRLNESDPWAHNMLALLLEHQGLLVSAEDSLHKAVELLKESGI
AEVKCHQSQTEFSQVAKSNCCVQECEKSATFTDLCQFGLLLYCAGKLTDSYRVYQLALSM
ATSDTDKSDVYAALGMVAFKCQDLNGAKTALFTGYQICPSSVRGLLALCALGMVQMDLDL
IEATLKELSDLVQGARVLLMYITLTLQKTLPDGAGEAVAYVQQLLQQHQGLAGLWLLAAR
VAFQHLKDGALALTFTKEAVSRGSPNHQDALQCLSMAQLQLGKHNIRKAHENALSAAQKA
YHINPDSVSNTCLLVSALHGKAVIQHVMRGETTLIDYERRLLDQVLTSPDLSPALMCWCL
KQKSVAQILTMDMSGVLETIRKISENFPEEQLYSSVLECVVNNKHNELEALVLRNDSDFF
FWQILLKGLVNEEKYSEAGILMRQALQKARGESNLQVKQVCVAYIAWLAAQQLLVSLKQL
MVA
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttctaaataaaggtgcattgaaggcagcaagggaggcaatcaaaaacaaggac
ttcaaggaaactatcaagctgtgcaagatcattttaggagaagataagaacaattataat
gccttggtatttgttggggtggctgctgaaggtctagaacaatatgatcaggccttgaag
gcatatcgacgtgcagtagaaatttgtcctgaacaaattcttgcatggcagggtttgagc
agcttatatgccaaaaatccaggaatcattggtcaagaagaaataataggagtttatgaa
aaactagtggatctctactcaaatgaaaaggagaagaggcatgatgctgtgctcaagctt
atttctttgtggaaagactcagatctagagaaggctctgtctatgtaccagacactgatg
aaagagttggacccaggtactaaaagaacagaaacaatacaacagatggtcattttactt
aagagtcagcagctgctaacacctgatcaacaagaattacttctgtctggacttcaagag
ttgttgcatgcagacaacattgatgcttcagatacagagcttgaggagttgacaaacaat
tacttgaaactcgttcgaaagaacaaacaagagcagcttgacagtgaatgttcacaactt
ataaagcactttccaactttgtctgcaccaagagaagtcaaattactgttgttgttggac
cagcagatgggaaaagtgcaaaaggacaatgaaaagaccaagaagatggaagaaatagaa
gatttaatctccactctgacagaacaaagaaagagcctaaatagtgcagaattgattttg
gcacaaggatacttggcactgaacaaggattctgcaaccattgctctggactacctaaaa
aaaggtgtaaatgtgaagcctgacctgttttgtggtcacttctacttggcacagtgcctt
cacaaacttcatgaagatgtttcctgtttaaagacatgcaatgatgctctgacactcctg
tcaaaaaagagtagaattgtgactacaaacataaatgatgccgttcaacatctttttcta
ctggctgcacattgttgctatcagcaaggaacaaagtactctttggcacagtctcttgaa
tatttagataagcttacagaagatacagaggaaacccttgttctgagagcatacattatg
cttagccttggagattcagatgagctaaaggcatgcatagaaaaattagaaacaagcaac
agtacagaagtccgagctcttcaatcttggatagcttttaaaaataaagaatacacagct
gctgtgacgggcctagagaaatgtgtagctgaagatcccaataatgcactgtatctgttg
agattgggctgtgctctttgggaactaaggaacaccagtcaaactgacagacttcaggat
cggtgcttcaatttactgctaaaggcagcaaagttggatccttaccagagccatactttc
ttgtaccttggtcatttctacagagagcttaaaaatgatcagcagcgtgccagaaaatgc
taccagaaagcctttgctttaaattcaaacaatgaagaagcaggtgctgccctctgtgat
atgatggctgagtctggggaggaggacaatgtgaagactcttctggaaaatgtaacagcc
actgctgctgctggttgttccaaatgggcatggttgcggcttggcctttcccaggtccga
acaggggactcaactaatgcaatcgcttccttccagtcagcattgcgggctgatccctct
gatgaacatgtatgggagtgtctagcagaagcttacctgcacagaggaagctacacagca
gctctcaaagcatttacaaaggcagcagagcttcatccagactctacttacagtctttgt
caaattgctagtatcaaacagcaattaggtnngctgacagaagcagctgatgaatacaaa
ctagtccttagcaaatcttctcactatgtgccagcactcaaaggccttggagaaacctat
ctgcttatgtcacgtcgttttctggatcagtgcctgacaggccttgctttggatcattgt
cagcaagccatcacttgcctcactcgggcagcaactcagcgacctgacctttcctgtctg
tggaaactacttggggattgttgtactcttttgcaaggggtgaactccagaacttttagc
atttgtgttccaaggcgtctttgtcaagcaacttctgcagatgacaaagatgttatctcc
attggcaaactggaaatgttggagcttgcaacaaagtgctacggaaaggccctcaaaatt
cttcctgaaaattcttctctttggcacgactttggtatcagcttctactaccagtgctgt
cagttgaagagcagttctgaagcaaagcttcttgttgaaaaatctatcagtgttctgaaa
aaggcagttagcctggagccaactgatcccacacattggacagcattaggtgttgttgca
gccagccgctatgccaagaactattcccttgctcagcactgcttcatcaagtctatagaa
tgtgaaagcaataatgctgtggcctggacaaaccttggtactgtgtatctccagaatgat
aacttcaaactagcccacgaagctttcaaagtggcacaaaaccagaatcctgagtacatt
accagctggattgggcagggcctgataggggaaattgttgcacatgaagatgcaatggac
cttttccggcacaccactgacattggtgttcatatggagagttgtattggctatggtcac
tgggtgattacaactcttctggatgtcaccaaccagcacacacctgcattccagtactgt
atcaaacagatggctgccattcctgttgcagtgacagctcttactagatttacacggctt
aatgagtcagacccatgggctcacaacatgcttgctttgctgcttgagcaccagggcctt
ctggtttccgcagaggatagcctgcacaaagctgtagaacttctgaaggaatctgggatt
gctgaagtgaagtgccatcaaagtcagactgaatttagccaggttgctaagagcaattgc
tgtgttcaggaatgtgagaaaagtgccacgttcactgatctgtgtcagtttggtttatta
ttatactgtgctggtaaactgacagacagttacagagtgtatcagcttgccctttcaatg
gctaccagtgatacagacaagtctgatgtctatgctgctttgggaatggtagcatttaag
tgtcaggatcttaatggagcaaagaccgctctttttactggttaccagatctgtccatca
tctgtccgtggcctcttagcattgtgtgcacttggaatggtccagatggatttggatctc
atagaagctaccctgaaagagctgtctgaccttgtgcaaggggcgagagtcttgttgatg
tacatcactcttacattacagaagacacttcctgatggtgcaggtgaggctgttgcttat
gtgcagcagttactgcagcagcatcagggccttgcaggcctgtggctgttggcagcacgg
gtggcatttcagcatttaaaggatggagctctggctttgacctttacaaaggaggccgtt
agtcgtggatcaccaaatcatcaggatgcattgcagtgtctctccatggctcagctacag
ttaggaaagcacaacatcagaaaagcccatgaaaatgctttaagtgcagcgcaaaaggct
tatcatatcaatccagacagtgtgtctaatacctgtctgctggtgagtgcccttcatggt
aaggcagtcatccaacatgttatgagaggggaaacaactctgattgactatgaacgtcgg
cttctggatcaagtactgacttccccagacctgagtcctgctttgatgtgttggtgtctc
aagcaaaaatcagtagcacagattctgacgatggacatgtctggtgttttggaaacaatc
agaaagatttctgagaactttccagaagaacagctttattcttcagtattggagtgtgtt
gtgaacaacaaacacaatgagctggaggccttggtccttagaaatgattcagacttcttc
ttctggcagattttgctgaaaggacttgtgaatgaagaaaaatattcagaagctggaatt
ttgatgaggcaggctctgcagaaagctagaggggagagtaatttacaggtcaagcaggtg
tgtgtggcttacatagcatggctggcagcccagcagttactggtaagtctcaaacagcta
atggtagcatga
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integrated database retrieval system
