Pomacea canaliculata (golden apple snail): 112563715
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Entry
112563715 CDS
T05881
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03020
RNA polymerase
pcan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112563715
09124 Replication and repair
03420 Nucleotide excision repair
112563715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcan03021
]
112563715
03400 DNA repair and recombination proteins [BR:
pcan03400
]
112563715
Enzymes [BR:
pcan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
112563715
Transcription machinery [BR:
pcan03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
112563715
DNA repair and recombination proteins [BR:
pcan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
112563715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
112563715
NCBI-ProteinID:
XP_025093767
LinkDB
All DBs
Position
LG5:complement(32239473..32257715)
Genome browser
AA seq
1176 aa
AA seq
DB search
MYSQEEEMYSHDDDSDEITTELWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIV
EDAPPIDLQAEAQHTSGQVETPPRYLLKFEQIYLSKPTHWEKDGVATPLMPNEARLRNLT
YSAPLYVDIKKTVIKEGEDPVETLHQKTYIGRIPIMLRSTYCLLNGLTDRDLTELNECPL
DPGGYFIINGSEKVLIAQEKMATNTVYVFQQKDSKYAFKTEIRSCLEHSSRPTSTLWVNM
MARGGGGARKSAIGQRIISILPYIKQEIPIIIVFRALSFVSDRDILEHIIYDFDDPEMME
MVKPSLDEAFVIQEQTVALNFIGARGAKPGVTKEKRIKYAREILQKEMLPHVGVSEFCET
KKAYFLGYMVHRLLLAALGRREVDDRDHYGNKRLDLAGPLLAFLFRGLFRNLMKEVRMYA
QKFIDRGKDFNMELAIKTGIVTDGLMYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTL
SHLRRLNSPIGRDGKLARPRQLHNTQWGMICPAETPEGAAVGLVKNLALMAYISVGSQPS
PILEFLEEWSMENLEEVAPSAIADTTKIFVNGCWVGIHRDPDQLMSTLRKLRREMDIIVS
EVSMIRDFQDREVRIYTDAGRICRPLLIVENQKLLLKKSHIQQLKEREYNNYSWQDLVSS
SVVEYIDPLEEETIMLAMTPDDLREDKESAYCSTYTHCEIHPAMILGVCASIIPFPDHNQ
SPRNTYQSAMGKQAMGVYITNYHVRMDTLAHGLFYPQKPLVTTRSMEYLRFRELPAGINS
VVAIASYTGYNQEDSVILNASSIDRGFFRSFFFRSYKDAESKKGLDQEEVFEKPTRETVQ
GMRPALYEKLDDDGIIAPGTRVSGDDVLIGKTITLPVSEDELEGAVKRFSKRDASVFMRR
SETGIVDQVMLTINNDGYKFCKIRVRTVKTPQIGDKFASRHGQKGTCGISYRQEDMPFTC
EGITPDIIINPHAIPSRMTIGHLIECLQGKVAANKGEIGDATPFNDTVNVQKISKLLQQY
GYNLRGNEVLFNGFTGRKLNAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGR
SRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYRVHVCNLCGLIAIANLRNQTFECR
SCKNKTQISQIRIPYACKLLFQELMAMSIVPRMMVT
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtatagccaagaagaagaaatgtacagtcatgacgatgacagtgatgagatcacaaca
gaactttggcaggaggcatgttggattgttatcagttcctacttcgacgaaaaaggactg
gtaagacagcaactggactctttcgatgagtttattcagatgtctgtgcaacgaattgtt
gaagatgcaccacctattgacctacaggctgaagctcaacatacatcaggccaagtggag
acaccacctcgatatttattaaagtttgaacagatctatttgtctaaaccaactcactgg
gaaaaagatggtgttgcaactcctcttatgccaaatgaagccagacttagaaatctcacg
tactcggcaccactgtatgtggacatcaagaaaacagtgatcaaggaaggtgaagaccct
gttgaaactctccatcagaaaacatacatcgggaggattcccatcatgctgaggtcaact
tactgtctcctgaatggacttactgaccgtgacctgactgaactgaatgagtgtcctttg
gatccaggaggttattttatcatcaatggttctgagaaggtcctcattgctcaggagaaa
atggctactaatacagtgtatgtgtttcagcagaaagactcaaagtatgcattcaagact
gagattcgttcttgccttgagcattcatctcgtcctacgagtaccctttgggtgaacatg
atggccagaggtggagggggtgcaagaaaaagtgctataggacaacgaattatttctatt
cttccttacatcaaacaggagatacccattatcatcgtgttccgtgctcttagttttgtg
tctgatcgtgatattttggagcacataatatatgattttgatgacccagagatgatggaa
atggtcaagccatctcttgatgaggcctttgtgatccaagaacagaccgtagctctcaac
tttattggtgctagaggtgctaagccaggtgtgaccaaagagaagcgtatcaagtatgct
cgtgaaatcctgcagaaggagatgctaccacatgtgggagtcagtgaattctgtgaaacc
aagaaagcttacttcctgggctacatggtgcatcgacttcttcttgctgctctgggtcga
agagaggttgacgacagagatcactatggcaacaaacgcttggatctagctgggccactt
ttagcttttctcttcagaggattgttcaggaacctgatgaaggaggtgaggatgtatgca
cagaagtttattgatcgagggaaggacttcaacatggagctggccatcaagactggcatt
gtgactgatggtcttatgtactcactggctacaggaaactggggtgaccagaagaaggct
caccaagctagagctggtgtatctcaggtgttaaatcgcttgacttttgcctctacactt
tcccatttgcgacgtctgaactcgcctattggtcgtgatggaaagctggctcgaccgcgt
cagctgcacaacactcagtggggaatgatttgtcctgcagaaacacctgagggagctgct
gttggactagtgaaaaatcttgccttgatggcctacatctctgttggttctcagccatct
ccaatcctagagttcttggaagagtggagcatggagaacctggaagaagtagcaccatct
gccattgcagacacaacaaagatttttgtcaatggatgttgggtaggcatccatcgtgat
cctgaccaacttatgtccacacttcgcaaactaagacgagagatggacatcattgtttct
gaggtgtccatgatcagagattttcaagacagagaggtgcgcatctacactgacgctggt
cgcatttgtcgcccactgctcattgtagagaaccagaaactgctgttgaaaaaaagccac
atccagcagctgaaagagagagagtacaacaactacagttggcaggatctggtgtcaagc
agtgtggtggagtacattgatccactagaggaggaaactataatgttagcaatgacccct
gatgaccttagagaagacaaagagtcagcctactgctctacatacactcattgtgagatc
cacccagcgatgattcttggtgtttgtgcatccattattcctttccctgatcataatcag
tccccccgaaacacataccagtcagctatgggtaagcaggccatgggtgtatacatcacc
aactaccatgttcgcatggacactttggctcatggcctcttctaccctcaaaaacctctt
gttacaacccgctctatggagtacctccgtttcagggagcttccagcaggtatcaattca
gttgtagccattgccagctacacaggttacaaccaagaagattctgtcatcttgaatgct
tcatccattgacaggggctttttcaggtcatttttcttccggtcttacaaagatgctgaa
tccaagaaaggtttagatcaggaagaggtcttcgagaagccaacaagagaaacagtgcaa
ggtatgcggccagcattgtatgagaagctggacgatgatggcatcattgcaccaggaact
cgtgtctctggtgatgatgttcttattggcaaaactattactcttcctgtcagtgaggat
gagctggaaggagcagtaaagagattttccaaacgagatgccagtgtgttcatgaggcga
agtgagactggcattgtagatcaggtgatgttaactattaacaatgatggatacaagttc
tgcaaaattcgtgtgcgcacagtgaagacaccacagattggagacaagtttgccagccgc
catggccaaaaaggaacttgtggtatttcctacagacaggaggacatgcctttcacatgt
gaaggcataacaccagatatcatcatcaaccctcatgccatcccctcacgtatgaccatt
ggtcacttgatcgagtgtctgcaaggaaaagtagctgcaaacaagggtgaaattggtgat
gctacaccttttaacgatactgtaaatgtgcagaagatttccaaacttcttcaacagtac
ggttacaaccttcgtggcaatgaggtgcttttcaatggctttacggggcgtaagctcaat
gcacaagttttcctgggtcccacctactaccaacgcctcaaacatatggtggatgacaag
atccactctcgggctcgaggtcctgtgcaaatcctgaacaggcaacccatggagggtcga
tcccgtgatggtggtctgcgctttggagagatggagcgtgactgtcagattgcccatggt
gctgcacagtttctccgggaacgtctttttgaggcctctgacccatatcgtgtgcatgtc
tgcaatctttgtggtctcattgctattgctaacctcagaaatcagacttttgaatgtcgc
agctgcaaaaacaaaacccagatttcacaaattcgcatcccatatgcatgcaagttgctg
ttccaagagcttatggcaatgagcattgttcccaggatgatggtcacgtga
DBGET
integrated database retrieval system
