Phalacrocorax carbo (great cormorant): 104041503
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Entry
104041503 CDS
T08596
Name
(RefSeq) LOW QUALITY PROTEIN: guanine nucleotide exchange factor VAV2-like
KO
K05730
guanine nucleotide exchange factor VAV
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04510
Focal adhesion
pcao04517
IgSF CAM signaling
pcao04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104041503
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104041503
09142 Cell motility
04810 Regulation of actin cytoskeleton
104041503
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Paralog
GFIT
Motif
Pfam:
RhoGEF
SH2
PH
SOS1_NGEF_PH
SH3_2
C1_1
SH3_1
RHG20_PH
SH3_9
DUF7145
PH_10
C1_2
DH_Alsin
ANC1_spectrin
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
104041503
NCBI-ProteinID:
XP_009499079
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
SSEREDVQRVPTPDANGECGLRILGEDIYDCVPCEDEGDDIYEDIIRVEVQQPMKMGMTE
DDKRNCCLLEIQETEAKYYKTLEDIEKNYMNPLRLVLTPQDMEAIFINLEDLIKVHFNFL
RAIDVSMMSGGSSLAKVFLEFKERLTASHMGPAVLQAERTECTLKVQDGKFKLQDLLVVP
MQRVLKYHLLLKELLSHSSDRPEKQQLKEALEAMQDLAMYINEVKRDKETLKKISEFQSS
IENLQVKLEEFGRPKIDGELKVRSIVNHTKQDRYLFLFDKVVIVCKRKGYNYELKEIIEL
LFHKMTDDPMNNKDIKKWSYGFYLIHLQGKQGFQFFCKTEEMKRKWMEQFEMAMSNIKPE
KANANHHSFQMYTFEKTTNCKACRMFLRGTFYQGYLCPKCGAGAHKECLEIIPPCKIGSS
ADQDSLSAGPGPKMVAVQNYHGTPAPPGKPVLTFQIGDVIELLRGDPDSPWWEGRLLQTK
KSGYFPSSSVKPCPVDARPPNSRPPSREIDYTAYPWFAGNMERQQTDNLLKSHVSGTYLI
RERPAEAERFAISIKFNEEVKHIKVVEKDNWIHITEAKKFESLLELVEYYQSHSLKESFK
QLDTTLKYPYKSRERSTSRTFTRSPASCASYNFSFLSPQGLNFSSQSSSSPFWS
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
cctccagcgagcgggaggatgtgcagcgggtaccgactcctgatgcaaacggggagtgtg
gactgaggattctgggggaggatatttatgactgcgtcccctgtgaagatgaaggcgatg
atatctatgaagatatcatcagagtggaagttcagcagcccatgaaaatgggaatgacag
aagatgacaaaagaaattgctgtttgctagaaatccaagaaactgaggccaaatactaca
aaacacttgaagatatagaaaagaactacatgaacccactgaggctggtactgactcccc
aagacatggaagctatttttatcaatttggaggacctaattaaagtgcacttcaatttcc
tgagagccatcgacgtctctatgatgtctggaggaagcagcctggcaaaagtgtttctgg
aattcaaagagaggctcacagcctcccatatggggccagctgttttgcaggcggaacgta
cggaatgcacactaaaggttcaggacgggaaatttaaattgcaagatctgctggtggttc
caatgcaaagagttttgaaatatcatctcctgttaaaagagctgctgagccattcatcgg
accgaccagagaagcagcagctgaaggaggctctggaggcgatgcaggacttggccatgt
acataaatgaagtgaagagggacaaagagactttaaagaaaataagtgaatttcagagct
ctatagaaaatctgcaagtgaagctggaggagttcgggaggccgaagatcgatggtgagc
tgaaggtccgctccatagtcaaccacaccaagcaggacaggtatttatttttatttgata
aagtggtgatcgtctgcaaaaggaaaggatacaattatgagctgaaagaaattattgagc
tgctcttccacaagatgacggacgaccctatgaacaacaaggacattaagaagtggtcat
acggcttctacctaattcaccttcagggaaagcagggcttccagttcttctgcaagacag
aggaaatgaagaggaagtggatggagcagtttgaaatggcaatgtccaacataaagccag
agaaagccaatgcaaatcaccatagctttcagatgtacacatttgaaaagactaccaact
gcaaagcctgcaggatgttcctaagaggaaccttctatcagggctatctttgtccaaaat
gtggagcaggtgctcataaggagtgcttagagattattcctccctgcaagatcggttctt
cagcagaccaggattcgctgagcgctggacctggtcctaaaatggtggcagttcagaact
accacggaaccccagccccccccgggaagccggtgctgacgtttcaaattggggacgtga
tcgaactgctgaggggggaccccgactcgccatggtgggaggggcgattgctgcagacaa
agaaatcgggttattttcccagctcgtcagtaaagccctgccccgtggatgcgaggcctc
ccaacagccggccgccctcgcgggagatcgactacacggcgtacccatggttcgcaggga
acatggagcggcagcagacggacaacctgctcaagtctcacgtcagcggcacctacctga
tccgggagcggccggccgaggccgagcgctttgccatcagtattaagttcaacgaggagg
tgaagcacatcaaggtggtggagaaggacaactggattcacatcacagaagccaagaagt
ttgaaagcttgctggagctggtcgagtactaccagagccactcgctgaaggagagcttca
agcagctggacacaacactgaaatacccctataaatctcgggagcgctctacctccagga
ccttcacccgctctccagcctcctgcgcttcctacaacttttcttttctcagtcctcagg
gcctcaacttttcttctcagagctcctccagtcccttctggtcag
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