Phalacrocorax carbo (great cormorant): 104044755 Help Entry 104044755         CDS       T08596                                  Symbol CAPN1 Name (RefSeq) calpain-1 catalytic subunit   KO K01367   calpain-1 [EC:3.4.22.52] Organism pcao  Phalacrocorax carbo (great cormorant) Pathway pcao04141   Protein processing in endoplasmic reticulum pcao04210   Apoptosis pcao04217   Necroptosis pcao04218   Cellular senescence pcao04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:pcao00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     104044755 (CAPN1)  09140 Cellular Processes   09143 Cell growth and death    04210 Apoptosis     104044755 (CAPN1)    04217 Necroptosis     104044755 (CAPN1)    04218 Cellular senescence     104044755 (CAPN1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     104044755 (CAPN1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:pcao01002]     104044755 (CAPN1) Enzymes [BR:pcao01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.22  Cysteine endopeptidases     3.4.22.52  calpain-1      104044755 (CAPN1) Peptidases and inhibitors [BR:pcao01002]  Cysteine peptidases   Family C2: calpain family    104044755 (CAPN1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_C2 Calpain_III EF-hand_6 EF-hand_1 CAPN13-like_C_EFh Motif Other DBs NCBI-GeneID:  104044755 NCBI-ProteinID:  XP_009502925 LinkDB All DBs Position Unknown AA seq 705 aa AA seqDB search MMPFGGMAARLQRDRLRAEGVGQHDNAIKYFNQDYEALKQECIESGTLFRDPQFPAGPSA LGFKELGPHSSKTRGVQWKRPSELVDDPQFIVGGATRTDICQGALGDCWLLAAIGSLTLN EELLHRVVPHGQSFQEDYAGIFHFQIWQFGEWVDVVVDDLLPTKDGELLFVHSAECTEFW SALLEKAYAKLNGCYEALSGGSTTEGFEDFTGGVAEMYDLKRPPRNMSHIIRKALERGSL LGCSIDITSAFDMEAVTFKKLVKGHAYSVTGFRDVHYRGPQEQLIRIRNPWGQVEWTGAW SDGSSEWNNIDPGDREELQLKMEDGEFWMSFRDFMREFSRLEICNLTPDALTKDELSRWH TQVFEGTWRRGSTAGGCRNHPATFWINPQFKIKLLEEDDDPGDDEVACSFLVALMQKHRR RERRVGGDMHTIGFAVYEVPEEAQGSQNVHLKKDFFLRNQSRARSETFINLREVSNQIRL PPGEYIVVPSTFEPHKEADFILRVFTEKQSDTAELDEEISADLADEEEITEDDIEDGFKN MFQQLAGEDMEISVFELRTILNRVIARHKDLKTDGFSLDSCRNMVNLMDKDGSARLGLVE FQILWNKIRSWLTIFRQHDLDKSGTMSSYEMRMALESAGFKLNNKLHQVVVARYADADMG VDFDNFVCCLVKLEAMFRFFHSMDPEGTGTAVMNLSEWLLLTMCG NT seq 2118 nt NT seq  +upstreamnt  +downstreamnt atgatgccctttggtgggatggctgctcgactgcaaagggaccgcctgagagctgagggg gttggtcaacacgataacgccatcaagtacttcaaccaggactatgaggccctcaaacag gagtgcattgagagcggcaccctctttagggacccccagttcccagccggcccctctgcc cttggattcaaggagctggggccacactccagcaagacacggggggtgcaatggaagcgt ccgtcggaattagtggatgaccctcagttcattgttggtggtgcaacccggacagacatc tgccagggggctctgggcgactgttggctgctggctgccatcggctccctcacgctcaat gaggagctcctgcaccgcgtggtgccccatgggcagagtttccaggaggactatgctggc attttccacttccagatctggcagttcggtgagtgggtggacgtggtggttgatgacctg ctgcccaccaaggacggggagctcctgttcgtgcactcagcagagtgcaccgagttctgg agtgctctgctggagaaggcctatgccaagctgaatggctgctacgaggcgctctcaggg ggcagcaccactgagggcttcgaggacttcactggtggcgtggcagagatgtacgacctc aagaggcctccacgcaacatgagccacatcatccgcaaggcactggagaggggttccctg ctgggctgctccatcgacatcacaagtgcctttgatatggaagcagtgaccttcaagaag ctggtgaagggccacgcctattctgtcacaggcttcagagacgtgcactatcggggtccg caggaacagctcatccgcatcaggaacccctggggtcaggtggagtggactggagcctgg agtgatggctcctctgagtggaacaatattgatcctggcgatagggaagagctgcagctg aagatggaggatggagagttctggatgtctttccgggacttcatgagagagttctccagg ctggagatctgcaacctgacccccgatgccctcaccaaggatgagctcagcaggtggcac acgcaggtattcgagggcacgtggcgccgggggagcactgccggtggctgcaggaatcac ccagccacattctggatcaaccctcagttcaagatcaagctgttggaagaggatgatgac cccggggacgatgaggtggcctgcagcttcctagtggctctgatgcagaagcaccggcgg cgggagcggcgagtcgggggtgacatgcacactattggctttgctgtctacgaggttcct gaggaggcccagggcagccagaatgtgcatttgaagaaggacttcttcctgcgaaaccag tcacgggcacggtctgagaccttcatcaacctgcgggaggtgagcaaccagatccggctg cctcctggcgagtacatcgttgtgccctccaccttcgagccgcacaaggaggccgacttc atcctgcgggtcttcactgagaagcagtcagacacggcggagctggatgaggagatctcg gcagacctggcagatgaggaggaaataactgaggatgacatagaggatggcttcaagaac atgttccagcagctggcaggggaggacatggaaatcagcgtctttgagctccggactatt ctgaacagagtcatcgctagacacaaagatctgaagacggatgggttcagcttggactcc tgccgcaacatggtcaacctgatggataaagatggcagtgcccgcctcgggctggtggag ttccagatcctgtggaacaagatccggagctggctgacgatcttccgccagcatgacctg gataaatcaggcaccatgagctcctatgagatgcgcatggctctagagtcagccggtttc aagctgaacaacaagctccatcaggtggtggtggcccgctatgcagatgctgacatgggc gtggactttgacaactttgtctgctgcctcgttaagctggaggccatgttcaggttcttc cacagcatggaccccgaaggcactggcactgccgtcatgaacctctctgagtggctgctg ctgacgatgtgcggctag

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