Candidatus Parvibacillus calidus: HWD63_08255
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Entry
HWD63_08255 CDS
T10915
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pcau Candidatus Parvibacillus calidus
Pathway
pcau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HWD63_08255 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcau03400
]
HWD63_08255 (ruvB)
Enzymes [BR:
pcau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HWD63_08255 (ruvB)
DNA repair and recombination proteins [BR:
pcau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HWD63_08255 (ruvB)
RecFOR pathway proteins
HWD63_08255 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
WHD_RuvB
AAA
AAA_5
TIP49
AAA_3
AAA_22
Mg_chelatase
AAA_14
nSTAND3
Rad17
AAA_16
TsaE
RNA_helicase
Sigma54_activ_2
MCM
AAA_18
NB-ARC
NTPase_1
NPHP3_N
AAA_33
Bac_DnaA
AAA_28
ABC_tran
AAA_17
nSTAND_NTPase5
KAP_NTPase
bpMoxR
NACHT
DUF815
Motif
Other DBs
NCBI-ProteinID:
QLH30923
LinkDB
All DBs
Position
1918438..1919475
Genome browser
AA seq
345 aa
AA seq
DB search
MYIVQNELLNSDTSHLSKEDKIIEKTLRPGYLGEFKGQRKIVDNLEVFIKAAKLRGEALD
HVLLHGPPGLGKTTLSNIIANELGTNLKVTSGPVLDKPGDLAGLLTNLEPNDVLFIDEIH
RLNTVVEEYLYSAMEDYKIDIMIDSGPNARSIQLALNPFTLIGATTRQGLLTAPMRARFG
INFHLDYYDIPTLEGIIKRAAGILNVRTERNGIHEIARRSRGTPRIAYALLRRVRDFAQI
KGEGVITLDIARMGLNALNVDESGLDEMDNRILRSIIEKFNGGPVGISTISTAVGEESGT
IEEVYEPFLIMSGFIQRTPRGRIVTRKAYDHLGIKPGPIQPSLFD
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atatatattgtgcaaaacgaattgttaaattccgataccagccatctgagcaaggaagat
aaaatcatcgaaaagacgcttcgacccggttatcttggtgagttcaaagggcaaaggaag
attgtcgataatcttgaggtctttatcaaagcagctaaactgcgtggagaggcccttgat
catgttttactccatggacctccgggattggggaagactactttgtccaatattattgcc
aacgagctaggcaccaatcttaaagtaacatcaggaccagttctggataaacccggtgac
ctggccggtttacttactaaccttgaaccaaatgatgtcctgtttattgacgaaatacac
cgactgaatacagttgtggaagaatatctatattcggccatggaggattataagatcgat
atcatgattgattccggaccgaatgcccgaagcattcagttagcgcttaatccttttaca
ctaatcggggcaacaacacgccaaggattattgacagcaccgatgagagcgaggtttgga
ataaacttccatctggactattacgacatacctaccttggagggaattatcaaaagagca
gcaggtattctgaacgtaagaacggaaagaaacggaatccatgaaatcgcaagaagaagc
cgcggaactccaagaatagcgtatgctttacttagaagagtccgtgattttgctcagatc
aaaggagagggtgtgatcacactcgatattgccagaatgggcctaaatgccttgaatgtc
gatgaaagcggtttggatgaaatggataatcggattttacgtagcatcatcgaaaaattc
aatggcggtcctgtaggtatcagcaccattagcacagcagtgggagaggaaagtggcacc
atcgaagaagtatatgagccttttctcatcatgtcaggcttcatacaaaggacaccacgc
ggaaggattgtcacaaggaaagcctatgatcatcttggaataaagcccggaccgattcaa
ccttcccttttcgattaa
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