Pseudomonas cavernae: D3880_10200
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Entry
D3880_10200 CDS
T08208
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
pcav
Pseudomonas cavernae
Pathway
pcav02010
ABC transporters
pcav03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D3880_10200
03070 Bacterial secretion system
D3880_10200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcav02000
]
D3880_10200
02044 Secretion system [BR:
pcav02044
]
D3880_10200
Transporters [BR:
pcav02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
D3880_10200
Secretion system [BR:
pcav02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
D3880_10200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_16
AAA_22
AAA_29
AAA_18
AAA_30
DUF87
PRK
AAA_21
MeaB
RsgA_GTPase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AYC32735
UniProt:
A0A385Z0L8
LinkDB
All DBs
Position
2203275..2205425
Genome browser
AA seq
716 aa
AA seq
DB search
MSDEHQGPAVQAEADTGLACLVMLARFHNVAASPEQLAHEYVEDGRQFAKPELLLAAKQL
GLKAKFVRSKVERLAYTPLPAIAASQDGRFFIIARLDDGKALIHDPLAQRPEVLSLEELH
ARWTGELILIRSEASLAGELSKFDFTWFIPAIVKYRKLLGEVLLVSFVLQIFALLTPLFF
QVVMDKVLVHRGLTTLDVIAVGLLGIMLFESALSGLRTYVFAHTASRIDVELGSRLFRHL
VTLPLAYFQARRVGDSVARVRELENIRSFLTGNAITLLLDVLFSVVFIAVMFYYSGWLTL
VVVLSLPLYFLISLLVTPALRARLNESFSRGAENQAFLVETVNGIDTLKAMAVEPQITRK
WDNQLAGYVAAGFKTQNLSSIANEAVSLVGKLVTVATLWLGARLVMEGQLSVGQLIAFNM
LAGRVSQPIMRLAQLWSNFQQTGVSVQRLGDILNTRTELSQATRSALPPLKGQIEFDQVQ
FRYRPDGSEVLRSISLTIQAGEVIGIVGRSGSGKSTLTRLLQRLYTPERGRVLVDGMDLA
LADVSSLRRQIGVVLQDNMLFHRSIRENIALTDPGAPIETVIQAAKMAGAHEFILELPEG
YDTLVGEHGASLSGGQRQRVAIARALIGNPRILIFDEATSALDYESERIIQQNMQTICQG
RTVIIIAHRLSAVRDANRIVVMDRGQIVEQGTHAELLTHQAGHYSRLHRLQQGGAA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgaacaccaaggaccggctgttcaagctgaggccgataccggccttgcctgt
ttggtcatgctcgcgcggtttcacaatgtggccgcctctcctgagcaactcgcccacgag
tatgtcgaagacggtcggcagtttgccaagccggaattgctcctggccgcgaagcagctc
ggtttaaaagccaagttcgtgcgcagcaaggttgagcggctggcctacactccactgccc
gccatcgccgccagccaagacgggcgctttttcatcattgcccgcctggatgacggcaaa
gccctgatccacgacccactggctcagcgtccagaagtcttgagtctcgaggaactgcac
gcgcgctggaccggtgagctgatcttgatccgctccgaagccagcctcgccggcgagctg
agcaagttcgacttcacctggttcatccccgctatcgtcaaataccgtaagttgctcggc
gaagtgctgctggtgtccttcgtgctgcagatctttgcgctgctgacgccgctatttttc
caggtggtgatggacaaggtgctggtccatcgcggcctcaccaccctggacgtgatcgcc
gtcggcctgctcggcatcatgctgttcgagagcgccctcagcggcctgcgtacctatgtg
tttgcccacaccgccagccgcatcgatgtcgagttgggttcacgcttgttccgccatctg
gtgaccttgccgctggcgtacttccaggcgcggcgggtcggcgactcggtggcgcgagtg
cgcgaactggaaaacatccgcagcttccttaccggtaacgccatcaccctgttgctggat
gtactgttctcggtggtgtttattgccgtgatgttctattacagcggctggctgaccctg
gtagtggtgctgtcgctgccgctgtacttcctgatctcactgctggtcaccccggcgctg
cgcgcgcgcctgaatgaaagcttcagccgcggcgcggaaaaccaggccttcctggtggaa
acggtcaacggtatcgataccctcaaagccatggcggtggaaccgcagatcacccgcaag
tgggacaaccaactggccggctacgtggccgccggtttcaagacgcagaacttgtcgtca
atcgccaacgaagcggtctcgctggtcggcaagctggttacggtcgccaccctctggctg
ggggcgcggctggtgatggaggggcagctgtccgtcggccagttgatcgcgttcaatatg
ctcgccgggcgggtgtcacagccgatcatgcggttggctcagctatggagcaacttccag
caaaccggcgtttccgtgcagcgtctgggcgacatcctcaacacccgtaccgagctgtcg
caagccacccgcagcgctctgccaccgctcaaaggtcagatcgagttcgatcaggtgcag
tttcgctaccgcccggatggctccgaggtgctgcgcagtatcagcctgaccatccaggcc
ggggaggtgatcggcatcgtcggccgctccggctccggcaaaagcaccctgacccgattg
ctgcaacgcctgtacacccccgaacgggggcgggtactggtggacggcatggacctggcc
ttggccgatgtgtcttcgctgcgccggcagatcggcgtggtgttgcaggacaacatgctg
ttccaccgcagcatccgcgagaacatcgccctgaccgatccgggtgcgccaatcgagacg
gtaatccaggcggccaagatggccggcgcccatgagttcattctcgagctgccagaaggc
tacgacaccctggtcggcgagcacggcgcctcgttgtcgggcgggcaacgtcagcgggtg
gccatcgcccgtgcgctgatcggcaacccacgcatcctgatcttcgacgaagccaccagt
gcgctggattatgagtcggaacggatcatccagcagaacatgcagaccatctgccaaggc
cgcacggtgatcatcatcgcccaccgcctgtccgccgtgcgcgatgccaatcgcatcgtg
gtgatggaccgtggccagatcgtcgagcaaggcacgcatgccgagttgctaacccaccaa
gctgggcattactcgcggctgcatcgcttgcagcaaggcggtgccgcatga
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