Piscinibacterium candidicorallinum: ACMDW7_09335
Help
Entry
ACMDW7_09335 CDS
T10926
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
pcaz Piscinibacterium candidicorallinum
Pathway
pcaz02024
Quorum sensing
pcaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACMDW7_09335 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACMDW7_09335 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcaz03019
]
ACMDW7_09335 (hfq)
03036 Chromosome and associated proteins [BR:
pcaz03036
]
ACMDW7_09335 (hfq)
Messenger RNA biogenesis [BR:
pcaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ACMDW7_09335 (hfq)
Chromosome and associated proteins [BR:
pcaz03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
ACMDW7_09335 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
SRP14
Motif
Other DBs
NCBI-ProteinID:
XOD95353
LinkDB
All DBs
Position
complement(2073040..2073282)
Genome browser
AA seq
80 aa
AA seq
DB search
MNKGQALQDPFLNQLRKEHVPVSIYLVNGIKLQGHIESFDQYVVLLRNTVTQMVYKHAIS
TVVPARAVNFSTDGGSEAAS
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagggcaagcgctacaagacccgttcctcaaccagcttcgtaaggagcatgtc
ccggtctccatctatctggtgaacgggatcaagttgcagggccacattgaatcgttcgat
caatacgtggttctgcttcgcaataccgtcacccaaatggtctacaagcacgccatcagc
accgttgtgcccgcacgtgccgtgaacttcagcacggatggtggtagcgaagccgcatcg
tga
DBGET
integrated database retrieval system