KEGG   Plasmodium chabaudi: PCHAS_0517500
Entry
PCHAS_0517500     CDS       T01108                                 
Name
(RefSeq) pre-mRNA-splicing factor CEF1, putative
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
pcb  Plasmodium chabaudi
Pathway
pcb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PCHAS_0517500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pcb03041]
    PCHAS_0517500
   03400 DNA repair and recombination proteins [BR:pcb03400]
    PCHAS_0517500
Spliceosome [BR:pcb03041]
 Complex B
  Other components
   Prp19 complex
    PCHAS_0517500
 Complex C
   Prp19-CDC5 complex
    PCHAS_0517500
DNA repair and recombination proteins [BR:pcb03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    PCHAS_0517500
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6
Other DBs
NCBI-GeneID: 3496567
NCBI-ProteinID: XP_743463
UniProt: A0A4V0K4Y1
LinkDB
Position
5:complement(630922..633624)
AA seq 900 aa
MRIQIKGGIWKNCEDEVLKAAVMKYGLNNWSRVASLLVRKSAKQCKARWYEWLDPSVKKT
EWSKEEEEKLLHLAKLFPTQWRTIAPVVGRTAQQCLEHYEYLLDEAEGKVYDKNKNPRQL
RPGEIDPAPETRPARADPVDMDDEEKEMLAEAKARLANTKGKKAKRKAREKQLEQARRLA
LLQKKRELKAAGIVSNNHYKKNDKNKIDHINEILFERKPLKGFYNVENEQNIEESQYGNK
HDQGTSADSNNKIRSIKSMEVENINRLTELGQDDNKQNKKGKKNKNEEHDLLNAIENYDK
QFNELSHLRKRVRLNLPEPVLNENELDEIIQINKEATSFNQIIKDYNDNNLVNGPINNIL
PSIASTPFVLNQGDMLSSIGTNLYNENNKSIKFSSVLDYSIQQAAQSIISNNINMPILHR
NEEFTKDSQKKGQSNKSYLKNDEDMDEGNIFDDDDNNAVDDIREHSKKIKEEIEKNKNRM
KNEEDIAEKQRLSAKNKIISDIKSFRKNISVYAQSIISYKGFKNDNSMINPSALVNEDMI
DEDDDNYEERVDRAKLLIKSSLANLPKETNVIELQIPENDNIPNDDGEVDMELEEDAQEA
EKRKKMEELKKEQDKFNKQNKVIQWNLPRPYFLQKINIFNVPNIDINEEQRIIQKELLSI
IKNDMFNYPIKGAEPVQSMMPYYDDVEDSYLQLARNSINTEIEKIKNLGIKNGYSFIQFD
NNTVNPNTTLKENEQNENSNETNDEAEFDEVDKNPWADLNEKVMYCPSKNIYTFVENMQE
KDIIECYKYKCDTLKKLINKNMEMYKKIENKYDIYTKGYQLKLKSYKKTFNSNFNTYINH
LSEQEALYNLHEGEQVYALQRMQQEKEENKKELEYHKSLQNIYAELLAANEQLKLAQGNK
NT seq 2703 nt   +upstreamnt  +downstreamnt
atgaggattcaaattaagggaggaatttggaagaactgcgaagatgaagttctgaaagca
gctgttatgaaatatggattaaataactggtctcgtgttgcttccttacttgttcgaaaa
tcagcaaagcaatgtaaagcacgctggtatgaatggttggatccatctgttaaaaaaaca
gaatggagcaaagaagaggaagaaaaacttttacatctagcgaaattatttccaacacaa
tggagaactattgctcctgtagttgggagaacagcacagcaatgcttagaacattatgaa
tatttattagatgaagctgagggaaaagtttatgataaaaataaaaatcctaggcaatta
agaccaggtgaaattgaccccgctccggaaactcggcctgctcgtgctgatcctgttgat
atggatgatgaagaaaaagaaatgttagcagaagctaaagctagattagcaaatactaaa
gggaaaaaagctaaaagaaaagccagagaaaaacaattagaacaagcaagaagattagca
ttattacaaaaaaaaagagaactaaaagctgctggtattgtttcaaataatcattataaa
aaaaatgataaaaataaaatcgatcatattaatgaaattttatttgaaaggaaaccatta
aaaggtttttataatgtagaaaatgaacaaaatattgaagaatctcaatatggaaataaa
catgaccaaggcacatctgctgacagtaataacaaaataagaagcatcaaatcgatggag
gtagaaaatataaatagattaacggagttgggacaagatgataataaacaaaataaaaaa
ggtaaaaaaaataaaaacgaagagcatgatcttttaaatgctatcgaaaattatgataaa
caatttaacgaattaagtcatctaagaaaacgagttcgattaaatttgcctgaacccgtt
ttaaatgaaaatgaattagatgaaattattcaaattaataaagaagcaacatcttttaat
caaataataaaggattataatgataacaatctggtaaatggccctataaataatatatta
cctagtattgccagtacaccatttgtattaaatcaaggagatatgttatcatctatagga
acaaatctttataacgaaaacaataagtcaataaaattttcaagtgtcctagattatagt
atacaacaagcggctcaaagtataatatcgaacaatataaacatgcctatcttgcataga
aatgaagaattcacaaaagattctcaaaaaaaaggacaaagtaataaaagctatttaaaa
aatgatgaagatatggatgaaggaaacatatttgatgatgatgataataatgccgttgat
gatattagagaacattcaaaaaaaataaaagaagaaattgaaaagaataaaaatagaatg
aaaaatgaagaagatatagcagaaaaacaaaggctatctgccaaaaataaaattattagt
gatataaaaagttttagaaaaaatataagtgtgtatgcacaatctattatatcctataaa
ggttttaaaaatgataattctatgattaatcctagtgcattagtaaatgaagatatgatt
gatgaagatgatgataattatgaggaaagagtagatagagctaaattgcttataaaatcc
tctttagcgaatttgccaaaagaaacaaatgttatcgaactacaaataccagagaatgat
aatattccaaatgacgatggagaagtggatatggaattagaagaagatgcacaagaggct
gaaaaaagaaaaaaaatggaagaactaaaaaaagaacaagataaatttaataaacaaaat
aaagttattcaatggaatttaccacgaccatatttcttacaaaaaataaatattttcaat
gtaccaaatatagatataaatgaagaacaaagaataatacaaaaagaattattatctata
ataaaaaatgatatgtttaattatcccattaaaggagctgaacctgtccaaagtatgatg
ccatattatgacgatgtagaagattcctatttacagctagctcgaaactctatcaataca
gaaatcgaaaaaattaagaatcttggaattaaaaatggatattcgtttatccaatttgat
aataatacagtaaatcctaatactacattaaaagaaaatgagcaaaatgaaaattcaaat
gaaacaaatgatgaagctgaatttgatgaggtggataaaaatccttgggctgatttaaat
gaaaaagttatgtattgcccttcaaaaaatatttatacatttgttgaaaatatgcaagaa
aaggatataatagaatgctataaatacaaatgtgatactttaaaaaaattaattaataaa
aatatggaaatgtataaaaaaattgaaaataaatatgatatatatactaagggatatcaa
ttaaaattaaaaagttacaaaaaaacgtttaattccaattttaatacatatattaatcat
ttgagtgagcaagaagctttatataatttacatgaaggggaacaagtttatgcattacaa
cgtatgcaacaagagaaggaagaaaataaaaaggaactagaatatcataaatctttacaa
aatatatatgctgaattgcttgccgcaaatgagcaattgaaacttgcccaaggaaataaa
taa

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