KEGG   Plasmodium chabaudi: PCHAS_1441800
Entry
PCHAS_1441800     CDS       T01108                                 
Name
(RefSeq) splicing factor 3B subunit 6, putative
  KO
K12833  pre-mRNA branch site protein p14
Organism
pcb  Plasmodium chabaudi
Pathway
pcb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PCHAS_1441800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pcb03041]
    PCHAS_1441800
Spliceosome [BR:pcb03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    PCHAS_1441800
 Complex B
    PCHAS_1441800
 Complex C
   U2 SnRNP specific factors
    PCHAS_1441800
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_7 HAS-barrel RRM_10
Other DBs
NCBI-GeneID: 3498258
NCBI-ProteinID: XP_745136
UniProt: A0A077TW18
LinkDB
Position
14:complement(1510610..1511073)
AA seq 109 aa
MSRRNIRLPAEVSRILYVRNLPYKITAEELYDIFGKYGTVRQIRKGNAEGTRGTSFVVYD
DIYDAKNALDHLSGFNVAGRYLVILYYDPVKAQKKKELQEKLKNEKESS
NT seq 330 nt   +upstreamnt  +downstreamnt
atgtctagaagaaatattcgattacctgctgaagtcagccgaatcctttatgtcagaaat
ttgccatacaaaataacggctgaggagctatacgacatttttggaaaatatgggacagtc
agacaaataagaaaagggaatgctgaagggactaggggaacttcatttgttgtttatgat
gatatatatgatgctaaaaatgcattagatcatttatctggttttaatgttgcaggaaga
tatttagttattctatattatgaccctgttaaggcacaaaagaaaaaagaattacaagaa
aaattaaaaaatgaaaaggaatcatcataa

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