Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_000260
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Entry
PCC21_000260 CDS
T02320
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Pathway
pcc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PCC21_000260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcc03021
]
PCC21_000260
03400 DNA repair and recombination proteins [BR:
pcc03400
]
PCC21_000260
Enzymes [BR:
pcc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PCC21_000260
Transcription machinery [BR:
pcc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PCC21_000260
DNA repair and recombination proteins [BR:
pcc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PCC21_000260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AFR01429
UniProt:
A0AA86DEY5
LinkDB
All DBs
Position
complement(28387..28662)
Genome browser
AA seq
91 aa
AA seq
DB search
MARVTVQDAVEKIGNRFDLVLVAARRARQIQTGGKDPLVPEENDKYTVIALREIEEGLIN
NQILDVRDRQEQQEQEAAEIQAVTAIAEGRR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaactgttcaagacgctgtagagaaaattggtaaccgttttgacctggtg
ttggtcgctgctcgtcgcgcccgtcaaatccagactggcggcaaagatccgctggttcct
gaagaaaacgataagtacaccgtgatcgcactgcgtgagatcgaagaaggtctgatcaac
aaccagattctggatgttcgtgaccgtcaggaacagcaagagcaggaagccgcagagatt
caggcggttaccgcgattgctgaaggccgtcgttaa
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