Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_022490
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Entry
PCC21_022490 CDS
T02320
Name
(GenBank) periplasmic pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Pathway
pcc00040
Pentose and glucuronate interconversions
pcc01100
Metabolic pathways
pcc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PCC21_022490
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PCC21_022490
Enzymes [BR:
pcc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PCC21_022490
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GFIT
Motif
Pfam:
Pectate_lyase_2
Motif
Other DBs
NCBI-ProteinID:
AFR03652
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Position
2544481..2546187
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AA seq
568 aa
AA seq
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MKRFALSLLAGLVALQASAATPDRLTIVNQYVDNVLTKAGDHYHGQSPTPLLADGVDPRT
GKQMEWIFPDGRQAVLSNFSAQQNLMRVLVGLSNLSGNPSYKQRAEAIVKYHFQHYQDES
GLLIWGGHRFVDLKTLQPEGPSEKEMVHELKNAYPYYDLMFSVDKDATARFIRGFWNAHV
YDWKIMETSRHGKYGQKMGALWQSPFEQQPPFFATKGLSFLNAGNDLIYSASLLYKYNKE
DGALVWAKRLAQQYVLPRDKATGLGVYQFTQALKRDETTDDADTHSKYGDRAQRQFGPEF
GPTALEGNMMLKGRTSTIYSENALMQLQLGKDLGAEGKELLTWTTDGLKAFAKYAYNESD
NTFRPMLANGKDLSNYVLPRDGYYGKKGTVIKPYPADNSFLLSYSRAYTVLPDAELWRVA
RGIARAQGLGELGSAPGKDVKVDLATKNNDPYALFALLDLYQASKVKDYLSLAEKVGDNI
ISTRYKNGFFMADPNRQYADVDTIEPYALLALEAAVRNKPQSVAPFLNGAGFTEGGYRME
DGSTRVSTRDNEIFLLNVGETLKPNNKK
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatttgcgctgtcgctccttgcgggtctggtcgctttacaggccagcgccgct
acgcctgaccgtctcaccatcgtcaatcagtatgttgataacgtgctgaccaaagctggc
gaccactatcacggtcagtcgcctacgccattacttgcggatggtgtcgatccgcgtaca
ggcaaacagatggagtggattttccctgatggtcgtcaggccgtgctctccaacttctcc
gcacaacagaacctaatgcgcgtactggtcggactcagcaacctgagcggcaaccctagc
tataagcagcgtgccgaagcgatagtgaagtatcactttcaacattatcaggatgagagc
ggcctgctgatttggggcggccaccgttttgtggatctaaaaacgctacagccggaaggc
ccgagcgaaaaagagatggtgcatgaactgaaaaatgcctatccctactacgatttgatg
ttcagcgtcgataaagatgcaaccgcacgctttattcgcggtttctggaatgcgcacgtt
tatgactggaagatcatggaaaccagtcgccacggtaaatacggacaaaaaatgggtgcg
ctctggcaaagcccgtttgagcaacagccgcccttcttcgccaccaaaggcctcagcttc
ctgaatgcgggtaacgatctgatctattccgcctcgctgctgtacaaatacaataaagaa
gacggcgcgctagtctgggcaaaacgtctggcacagcagtatgtgctgccgcgggataaa
gcgaccgggctcggcgtgtatcagtttacgcaggcgctgaagcgcgatgaaaccaccgac
gatgccgatacgcattccaaatatggcgatcgcgcccagcgtcagttcggcccagagttc
ggtcctaccgcgctggaaggcaatatgatgctgaaaggacgcaccagtacgatctattcc
gaaaatgcgctcatgcagctccagttgggtaaagatttaggtgcggaaggcaaggaactt
ctgacgtggacaaccgatggcctgaaagcctttgccaagtatgcctacaacgagtccgat
aatacgttccgcccgatgctcgctaacggtaaagatctttccaattacgttctgccgcgt
gatggctactacggcaaaaaaggcaccgtgatcaagccttatcctgcggataattcattc
ctgctgtcgtattctcgtgcctataccgttttaccggacgccgagctgtggcgtgtcgca
cgcggcatcgctcgcgcacaggggctgggtgagttaggttcagcgccgggtaaagacgtc
aaagtggatctcgctaccaagaacaacgatccttatgccctgttcgcgctgttggatctg
tatcaggcgagtaaagtgaaagactatctgtcgctggcggaaaaagtgggcgataacatt
atcagcacgcgttataagaacggcttctttatggccgatcctaaccgacaatatgctgat
gttgataccatcgagccttacgctttgttagcgctggaagcggcggtacgcaataaacca
cagtccgttgcaccgttcctgaatggtgcgggcttcactgaaggcggctaccgtatggaa
gatggctcaacccgcgtgtccactcgcgataacgagatcttcctgttgaacgttggcgaa
accttgaaacccaacaacaagaagtaa
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