Mixta calida: C2E16_02500
Help
Entry
C2E16_02500 CDS
T05419
Name
(GenBank) transcriptional regulator
KO
K21698
LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
Organism
pcd
Mixta calida
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcd03000
]
C2E16_02500
Transcription factors [BR:
pcd03000
]
Prokaryotic type
Helix-turn-helix
LysR family
C2E16_02500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AUY23892
LinkDB
All DBs
Position
complement(534334..535257)
Genome browser
AA seq
307 aa
AA seq
DB search
MERLKGMSVFAKVVELGSFTAAARQLQMSVSSISQIVAKLEDELQVKLLNRSTRSIGLTE
AGRIYYQGCRRMLNEAQQVHEQLYAFNNSPIGTLRIGSSSTMAQNVLATMTAEMLQEYPG
LTVNLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRRLGSMPMVVCAAKHYLEQHGTPEK
PADIANFSWLEYSVRPDSDFELIAPEGISTHLSPQGRFVTNDSQTLIRWLKAGCGIAYVP
LMWVIEEIKAGEVEILFSRYQSDPRPVYALYTQKDKLPLKVQVCIDYLSAWFKKVAQIYQ
EHRESGA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtctgaaaggaatgtcagttttcgccaaagtggttgaattaggttcatttacc
gccgctgcgcgccagttacaaatgagcgtctcttccatcagtcaaattgtggcaaaactg
gaagatgagctgcaggtgaaattactgaatcgcagcacgcgcagtatcggtcttaccgaa
gcgggacgtatctactatcagggctgtcgccgcatgctgaatgaagcgcagcaggtgcat
gaacagctctacgcgtttaacaattcgcccatcggcacgctacgtatcggcagctcctcc
accatggcgcaaaacgtattggcaaccatgacggctgaaatgctacaggaataccccggc
ctgacggtcaacctggtgaccggcattccggcgcccgatctgatcgccgatggtctcgac
gtggtgatccgcgtcggcgcgttacaggattccagccttttctcacgacggctcggctcg
atgccgatggtggtctgtgcggcgaaacattatctggagcagcacggcacgccggagaag
cccgccgatatcgcgaatttctcctggctggaatatagcgtgcgcccggacagcgatttt
gagctgattgcgccagagggcatcagcacccacctttcaccgcagggccgtttcgtcacg
aatgattcgcaaacgctgatccgctggctaaaagcgggctgcggcatcgcttacgtgcca
ttgatgtgggtgattgaggagattaaggcgggcgaggtggagattcttttcagccgctat
cagtccgatccgcgtccggtctatgcgctttatacccagaaagataagctgccgttaaag
gtgcaggtgtgtatcgactatcttagcgcctggtttaagaaggtggcgcagatttatcag
gagcaccgcgagagcggtgcgtag
DBGET
integrated database retrieval system
