Pediococcus claussenii: PECL_541
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Entry
PECL_541 CDS
T01713
Name
(GenBank) Uncharacterized P-loop ATPase protein UPF0042
KO
K06958
RNase adapter protein RapZ
Organism
pce
Pediococcus claussenii
Brite
KEGG Orthology (KO) [BR:
pce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pce03019
]
PECL_541
Messenger RNA biogenesis [BR:
pce03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PECL_541
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_22
AAA_33
AAA_18
AAA_16
CoaE
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AEV94842
UniProt:
G8PC23
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Position
547832..548719
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AA seq
295 aa
AA seq
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MAKNLQLVIVTGMSGAGKTVTMQSFEDLGYFVVDNMPPALLPKFFELITEAGNIEKVALV
VDLRSRTFYDQLLSMLTGDRRFGQDVDTEILFLDASDEELIARYKETRRAHPLAMDGRIA
DGVRKERELLAPLKTDSQFIIDTTKMTPRELREKIFAHFSDNKTAKFHVEILSFGYKYGL
PIDADIVMDVRFLPNPYYIPELRNHTGMDKDVYDYVMNQPATAKFYEHFIALLKETLPGY
EKEGKSNLTIAIGCTGGQHRSVAIAERLGSDLKDIYPTHVQHRDALKRKETVNRS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatttacagttggtaatcgtgactggaatgagtggtgctggaaaaacagta
accatgcagagctttgaagatcttggatactttgtagttgataacatgccgccagcctta
ctaccgaagttttttgaattgataaccgaggctggaaatattgaaaaagtggccctagtt
gtagatttaaggtcccgtacgttttatgaccaactcctttcaatgcttactggcgatcgt
cgtttcgggcaggatgtcgatacagaaatcctattccttgatgcttctgatgaagaattg
attgctcgttataaagaaacaaggcgtgctcatccgttggcaatggacggacgaatcgca
gacggtgttcgaaaagaacgtgaattattagcgcctctaaaaaccgattcacaatttatt
attgatacgacaaagatgacaccacgcgaattacgtgaaaaaatttttgctcatttctca
gataataaaactgctaagtttcatgtagaaattttatctttcggttataagtatgggctt
ccaattgatgctgatattgtaatggacgtaagatttttgccaaatccttactatattcct
gagttaagaaatcatactggaatggataaagatgtttatgattacgtaatgaatcagcca
gcaactgccaagttttatgaacattttattgcattactcaaagagacacttcctggatac
gaaaaagaagggaaatctaatttaacgattgcaattggttgtacaggtggacaacatcgt
tcggtagcaattgccgaaaggctaggcagtgatttgaaggatatatatcctactcatgtt
caacacagggatgcgttgaagcgaaaggaaacggtaaaccgctcatga
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