KEGG   Paenibacillus chitinolyticus: PC41400_22770
Entry
PC41400_22770     CDS       T06610                                 
Name
(GenBank) RNA polymerase sporulation sigma factor SigE
  KO
K03091  RNA polymerase sigma-E/F/G factor
Organism
pchi  Paenibacillus chitinolyticus
Brite
KEGG Orthology (KO) [BR:pchi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pchi03021]
    PC41400_22770
Transcription machinery [BR:pchi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PC41400_22770
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 HTH_3 Sigma70_r4_2 HTH_31 HTH_19 GerE Trp_repressor MarR_2 KORA HTH_23 HTH_6 HTH_37 HTH_AraC HTH_24 HTH_25 HTH_28 Phage_CII
Other DBs
NCBI-ProteinID: QAV20338
UniProt: A0A410X150
LinkDB
Position
complement(5000083..5000805)
AA seq 240 aa
MRIKWKLQMLIFYYKILIFFGLKGEEIYYIGGSEALPPPLTREEEEYLLGKLPSGDAAIR
AMLIERNLRLVVYIARKFENTGINIEDLVSIGAIGLIKAVNTFDPEKKIKLATYASRCIE
NEILMYLRRNSKIRTEVSFDEPLNIDWDGNELLLSDVLGTENDTIYRNIEEQVDRKLLHK
ALDKLTDRERTIMELRFGLQDGEEKTQKDVADQLGISQSYISRLEKRIIKRLRKEFNKMV
NT seq 723 nt   +upstreamnt  +downstreamnt
atgcggatcaaatggaaattgcagatgctaattttttattacaagattcttatctttttc
ggtctgaaaggtgaagaaatttattacataggaggaagcgaagcactgcctcctccgcta
acgcgggaagaagaggaatatttgcttggaaaactgccctccggggacgcggccatccgt
gccatgctgattgaacgcaacctccggttggttgtctatatagcccgtaaatttgaaaat
acgggcattaacattgaggatctggtctccataggagcgatcggtcttattaaagcggtt
aatacgttcgaccctgagaaaaaaattaaattggcgacttatgcgtcacgctgcatcgag
aatgaaattctcatgtatctccgccgcaacagcaaaatacggacagaagtgtcgttcgac
gaaccgctgaatatcgattgggacggaaacgagctgttattgtccgatgtgctgggcacc
gagaacgatacgatctaccgcaacatcgaagagcaggtagaccgcaagctgctgcataaa
gcgctcgataagctgacggaccgggagcgaacgatcatggaacttcgttttggtctccag
gacggtgaggagaaaacgcagaaagacgttgcggatcagctcggcatttcccagtcctat
atttcccggctggaaaagaggatcatcaaacggctgcgcaaggagtttaataaaatggtt
taa

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