KEGG   Pochonia chlamydosporia: VFPPC_01994
Entry
VFPPC_01994       CDS       T09407                                 
Name
(RefSeq) nuclear pore protein (Nic96)
  KO
K14309  nuclear pore complex protein Nup93
Organism
pchm  Pochonia chlamydosporia
Pathway
pchm03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    VFPPC_01994
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pchm03019]
    VFPPC_01994
Messenger RNA biogenesis [BR:pchm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     VFPPC_01994
SSDB
Motif
Pfam: Nic96 Nucleoporin_FG
Other DBs
NCBI-GeneID: 28845715
NCBI-ProteinID: XP_018138766
UniProt: A0A179F691
LinkDB
Position
1:complement(7543738..7547326)
AA seq 1170 aa
MSLFGQSTAGASSSPFGQPAQNQQQSQGGGGLFGAAQQNKPATGGLFGGSQQQSGTTGGG
LFGQSTQQSTTPTTGGGLFGAAQQNKPATGGLFGGGQQQTGTTGGGLFGQSTQNQTPGAT
GGGMFGGQPQAQQQQKPSLFGGATGSSVFGGAATTPQPGALSGTTLGGGSSRPSMFGSTT
TASIQQQPQQNAGLLGGSLWGASTQTAQPQNAQSQQPAGAYFDSLYAKTQKEGGAKTNME
DLPSLELGLGDLRHRLRKLQSKQNEKPLDGKAHYLLAASGVDPGAAAKDLGMLDVQGGRV
ERAHGYTPSEIDVETYLSNLQTKTTLDMISDGLDRSIRDFDTFLEDNVAMEWDAQRKRIY
QHFGIKPREDSAAAARESQGGFGRSRRKSQAAPARTGRNSVLGNTMLQRSVIGTPSRIGT
HQPEFSDVDRSADGSGSLKSRGTTEDRALRERQTKLAEKVRGLNAARVRQHPFPILTELG
ELEQKSHEPHAPHVVEAYRAMIEIVGEDPTAETTINGATAKERQFAGMYLDENPNSAASV
TMRKRTLHGSTAFLERQFLREVESLIAKHPHEAKLGGLPDITSKIKAYIRLRSARKDLVP
DNTELQQIQGEFVWAVVFYLLRSGHVTEAAQYVNDNSNHFRGIDRTFATYLNNYAASDDR
RITNRKLLDRCTNEYIQRSRNAPENSIDPFRMACYKVIGRIELSNRNLDGLNTDINDWIW
LQFNLAREGDKTIEMAGESYGLAELQSSIKEIGLKHFPKSTSEDTTNGSFGMFFYLQILS
GMFEDAIAYLYPFSYVDAVHFALALAYYGLLRPSDPMSTSNDLRSYSVKNLPQINFGRMI
GYYTRDFRAADVVSAVDYLTLICLNDDLGGEAGQRQSNLCHEALRELVLETREFSKLIGD
IRPDGHAIRGIIEERGPLIGLTEETDFVNTVTLQAASFADESGRTTDSVLLYHLAGEYDT
VVAIVSRALSEAISLEIGEDPMRLMPVKPRAAGADAESQQGSSLSLASIDDPVELAKTMM
TMYEREVMFYRKIQDQNKTACRVLLEMSSIKKLVEAGQWAQGLDKIRGLEILPLDAAGEA
STIRAYASKFSGLSQPVSINVPNLLMWTIICCVRQREQLTNGQFSGNEGTRKMMVEQLKQ
MTLDLTTYTSQLRYRFPPHLHEALARASAE
NT seq 3513 nt   +upstreamnt  +downstreamnt
atgtcgctcttcggccagtcaaccgccggcgccagttcctcgccatttggacagccggcg
cagaaccagcagcagtcccaaggcggcggaggccttttcggcgccgcgcaacaaaataag
cctgctactggcggcctgtttggcggaagccaacaacagagcggcacgacgggcggcggg
ctctttgggcagtcgacacagcagagcacgactcctacaaccggaggaggccttttcggt
gctgcgcaacagaataaacccgctactggcggtctctttggaggcggccagcagcagact
gggactacgggcggtggattgtttggacagtcgacacagaaccagactcctggtgcaact
ggaggcggtatgttcggcgggcagcctcaagcgcagcaacaacagaaaccatccttgttc
ggaggagcgactggttcatctgtatttggcggagctgctacaacaccacaaccaggcgcc
ctgagcggaactaccttgggaggaggttcgagtcggccatcgatgtttggatcgaccacg
accgcgagcatccagcagcaacctcaacaaaatgctggcttactaggcggcagcctttgg
ggtgcttcaacgcaaacagctcaacctcagaatgcccaatcccagcaacctgctggtgct
tacttcgacagcctgtacgccaaaacgcagaaagaaggcggcgccaagactaatatggaa
gatctccctagcctggagctcggccttggggatttgcgccaccgcctgagaaaactgcaa
tccaagcaaaatgagaaacctctggatggcaaggctcactacctgctcgctgcctcgggt
gtcgatcccggtgctgcggccaaggaccttggcatgttggatgtccaaggcggacgagtt
gagcgggcacacggctacacccctagtgagatcgatgtcgagacctacctgtcgaatttg
caaacgaagacgacactagacatgatttctgatggcttggatcgatctatccgcgatttc
gacaccttcctcgaggacaatgtggcgatggaatgggacgctcagcgcaaacgtatttac
cagcattttggcatcaagccgcgggaggattcggcggccgctgctcgagaatctcagggc
ggattcggccggtctagaagaaagtcgcaagcagctcctgctcgaactggccgaaatagt
gtgctgggcaacactatgctccagcgttctgtcattggcacgcccagccgcattgggact
caccagccagaattttccgacgtggaccgctctgctgatgggtcgggatctctcaaatct
cgaggcaccaccgaggaccgggcgcttcgtgagagacagaccaagttggcagaaaaggtt
cgtggtctcaatgctgctcgcgttaggcagcatcctttccccatccttaccgaactgggc
gagttggaacaaaaatcacacgagccgcacgcaccgcacgttgttgaggcttaccgtgcg
atgattgagattgtcggcgaagatcccactgctgaaacgacaatcaacggtgcaacggcc
aaggagcgccagtttgccggcatgtatctcgacgagaatcccaactctgcggcatccgtc
accatgagaaaacgaactctccatggctctactgccttcctcgaacggcagttcctgaga
gaggtcgagtctctgattgccaagcatccccatgaggcgaaacttggaggtctgccggac
attaccagcaagatcaaggcttacatccgtctccgctctgccaggaaggatttggttccc
gacaacacggagctgcagcaaatccaaggggagtttgtttgggccgtggtgttctacctc
ctgcgatccggccatgtgacggaagctgctcaatatgtaaacgacaacagcaaccacttt
agagggattgatcgcacgttcgccacatatctcaacaattacgcagccagcgatgaccgg
cggataacaaacaggaagttgttagaccgctgcaccaacgagtacattcagcggtcacgg
aatgctccggagaactccattgatccattccgtatggcgtgctacaaggtcattgggcga
attgagttgagtaaccgcaatttggacggtctcaacacggacatcaacgactggatctgg
ctgcagttcaaccttgctcgagaaggggacaagactatcgagatggccggcgagtcgtat
gggttggcagagcttcaatccagtattaaggagattgggctcaagcactttcccaaatcg
acctcggaagatactacgaacggtagcttcggcatgttcttctacctgcagattctgtct
ggcatgtttgaggacgccatagcctacctatacccgttctcatacgtggacgctgtccac
tttgccctggcgcttgcgtactacggtctgctgcgcccaagcgatcccatgtccacgtca
aacgacctacgaagctacagtgtcaagaatctgccgcaaatcaactttggccgtatgatt
ggatactacacaagagacttccgcgctgccgatgtcgtctctgctgtggactaccttacc
ctcatctgcctcaatgacgatctcggcggcgaggctggccagcgccagagcaacctttgc
cacgaggcgctgcgtgagttggtgctggagacacgcgaattcagcaagctcattggcgat
attcgaccagacggccacgctatccgtggcatcattgaggagcgtggcccgttgattggc
ctcactgaggagacagactttgtcaacacagtgacgctgcaagcggctagctttgcggac
gagagtggccgaacgactgactctgttctcctgtaccacttggccggcgagtacgatacc
gtcgtggctattgtcagccgcgcgcttagtgaggctatttctctggagattggtgaagac
ccgatgcgtctgatgcccgtcaagcccagagccgctggggcggacgcagagtcccagcaa
ggtagcagtctcagtctagcatccattgacgaccccgtcgagctggccaagactatgatg
accatgtacgagcgggaggtcatgttttaccgcaagatccaagaccaaaataagacggcg
tgccgggttctcttggaaatgagcagtatcaagaagctggttgaggctggtcaatgggct
caaggtctggataaaatccgaggtcttgaaatcctacccctggatgctgccggcgaagca
agcaccattcgcgcctacgcatccaagttttctggcttatcgcagcctgtctccatcaac
gttccaaacctgctcatgtggacgattatatgctgcgttcgacagagggagcagctcacc
aatggacagtttagtggcaatgaaggcacaaggaagatgatggttgagcagttgaagcag
atgactttggatttgacgacgtatactagtcagttgcggtatagattcccgccgcatttg
cacgaggcgctggcgagggcgtcggcggagtga

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