Pochonia chlamydosporia: VFPPC_01994
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Entry
VFPPC_01994 CDS
T09407
Name
(RefSeq) nuclear pore protein (Nic96)
KO
K14309
nuclear pore complex protein Nup93
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
VFPPC_01994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchm03019
]
VFPPC_01994
Messenger RNA biogenesis [BR:
pchm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
VFPPC_01994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
28845715
NCBI-ProteinID:
XP_018138766
UniProt:
A0A179F691
LinkDB
All DBs
Position
1:complement(7543738..7547326)
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AA seq
1170 aa
AA seq
DB search
MSLFGQSTAGASSSPFGQPAQNQQQSQGGGGLFGAAQQNKPATGGLFGGSQQQSGTTGGG
LFGQSTQQSTTPTTGGGLFGAAQQNKPATGGLFGGGQQQTGTTGGGLFGQSTQNQTPGAT
GGGMFGGQPQAQQQQKPSLFGGATGSSVFGGAATTPQPGALSGTTLGGGSSRPSMFGSTT
TASIQQQPQQNAGLLGGSLWGASTQTAQPQNAQSQQPAGAYFDSLYAKTQKEGGAKTNME
DLPSLELGLGDLRHRLRKLQSKQNEKPLDGKAHYLLAASGVDPGAAAKDLGMLDVQGGRV
ERAHGYTPSEIDVETYLSNLQTKTTLDMISDGLDRSIRDFDTFLEDNVAMEWDAQRKRIY
QHFGIKPREDSAAAARESQGGFGRSRRKSQAAPARTGRNSVLGNTMLQRSVIGTPSRIGT
HQPEFSDVDRSADGSGSLKSRGTTEDRALRERQTKLAEKVRGLNAARVRQHPFPILTELG
ELEQKSHEPHAPHVVEAYRAMIEIVGEDPTAETTINGATAKERQFAGMYLDENPNSAASV
TMRKRTLHGSTAFLERQFLREVESLIAKHPHEAKLGGLPDITSKIKAYIRLRSARKDLVP
DNTELQQIQGEFVWAVVFYLLRSGHVTEAAQYVNDNSNHFRGIDRTFATYLNNYAASDDR
RITNRKLLDRCTNEYIQRSRNAPENSIDPFRMACYKVIGRIELSNRNLDGLNTDINDWIW
LQFNLAREGDKTIEMAGESYGLAELQSSIKEIGLKHFPKSTSEDTTNGSFGMFFYLQILS
GMFEDAIAYLYPFSYVDAVHFALALAYYGLLRPSDPMSTSNDLRSYSVKNLPQINFGRMI
GYYTRDFRAADVVSAVDYLTLICLNDDLGGEAGQRQSNLCHEALRELVLETREFSKLIGD
IRPDGHAIRGIIEERGPLIGLTEETDFVNTVTLQAASFADESGRTTDSVLLYHLAGEYDT
VVAIVSRALSEAISLEIGEDPMRLMPVKPRAAGADAESQQGSSLSLASIDDPVELAKTMM
TMYEREVMFYRKIQDQNKTACRVLLEMSSIKKLVEAGQWAQGLDKIRGLEILPLDAAGEA
STIRAYASKFSGLSQPVSINVPNLLMWTIICCVRQREQLTNGQFSGNEGTRKMMVEQLKQ
MTLDLTTYTSQLRYRFPPHLHEALARASAE
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcttcggccagtcaaccgccggcgccagttcctcgccatttggacagccggcg
cagaaccagcagcagtcccaaggcggcggaggccttttcggcgccgcgcaacaaaataag
cctgctactggcggcctgtttggcggaagccaacaacagagcggcacgacgggcggcggg
ctctttgggcagtcgacacagcagagcacgactcctacaaccggaggaggccttttcggt
gctgcgcaacagaataaacccgctactggcggtctctttggaggcggccagcagcagact
gggactacgggcggtggattgtttggacagtcgacacagaaccagactcctggtgcaact
ggaggcggtatgttcggcgggcagcctcaagcgcagcaacaacagaaaccatccttgttc
ggaggagcgactggttcatctgtatttggcggagctgctacaacaccacaaccaggcgcc
ctgagcggaactaccttgggaggaggttcgagtcggccatcgatgtttggatcgaccacg
accgcgagcatccagcagcaacctcaacaaaatgctggcttactaggcggcagcctttgg
ggtgcttcaacgcaaacagctcaacctcagaatgcccaatcccagcaacctgctggtgct
tacttcgacagcctgtacgccaaaacgcagaaagaaggcggcgccaagactaatatggaa
gatctccctagcctggagctcggccttggggatttgcgccaccgcctgagaaaactgcaa
tccaagcaaaatgagaaacctctggatggcaaggctcactacctgctcgctgcctcgggt
gtcgatcccggtgctgcggccaaggaccttggcatgttggatgtccaaggcggacgagtt
gagcgggcacacggctacacccctagtgagatcgatgtcgagacctacctgtcgaatttg
caaacgaagacgacactagacatgatttctgatggcttggatcgatctatccgcgatttc
gacaccttcctcgaggacaatgtggcgatggaatgggacgctcagcgcaaacgtatttac
cagcattttggcatcaagccgcgggaggattcggcggccgctgctcgagaatctcagggc
ggattcggccggtctagaagaaagtcgcaagcagctcctgctcgaactggccgaaatagt
gtgctgggcaacactatgctccagcgttctgtcattggcacgcccagccgcattgggact
caccagccagaattttccgacgtggaccgctctgctgatgggtcgggatctctcaaatct
cgaggcaccaccgaggaccgggcgcttcgtgagagacagaccaagttggcagaaaaggtt
cgtggtctcaatgctgctcgcgttaggcagcatcctttccccatccttaccgaactgggc
gagttggaacaaaaatcacacgagccgcacgcaccgcacgttgttgaggcttaccgtgcg
atgattgagattgtcggcgaagatcccactgctgaaacgacaatcaacggtgcaacggcc
aaggagcgccagtttgccggcatgtatctcgacgagaatcccaactctgcggcatccgtc
accatgagaaaacgaactctccatggctctactgccttcctcgaacggcagttcctgaga
gaggtcgagtctctgattgccaagcatccccatgaggcgaaacttggaggtctgccggac
attaccagcaagatcaaggcttacatccgtctccgctctgccaggaaggatttggttccc
gacaacacggagctgcagcaaatccaaggggagtttgtttgggccgtggtgttctacctc
ctgcgatccggccatgtgacggaagctgctcaatatgtaaacgacaacagcaaccacttt
agagggattgatcgcacgttcgccacatatctcaacaattacgcagccagcgatgaccgg
cggataacaaacaggaagttgttagaccgctgcaccaacgagtacattcagcggtcacgg
aatgctccggagaactccattgatccattccgtatggcgtgctacaaggtcattgggcga
attgagttgagtaaccgcaatttggacggtctcaacacggacatcaacgactggatctgg
ctgcagttcaaccttgctcgagaaggggacaagactatcgagatggccggcgagtcgtat
gggttggcagagcttcaatccagtattaaggagattgggctcaagcactttcccaaatcg
acctcggaagatactacgaacggtagcttcggcatgttcttctacctgcagattctgtct
ggcatgtttgaggacgccatagcctacctatacccgttctcatacgtggacgctgtccac
tttgccctggcgcttgcgtactacggtctgctgcgcccaagcgatcccatgtccacgtca
aacgacctacgaagctacagtgtcaagaatctgccgcaaatcaactttggccgtatgatt
ggatactacacaagagacttccgcgctgccgatgtcgtctctgctgtggactaccttacc
ctcatctgcctcaatgacgatctcggcggcgaggctggccagcgccagagcaacctttgc
cacgaggcgctgcgtgagttggtgctggagacacgcgaattcagcaagctcattggcgat
attcgaccagacggccacgctatccgtggcatcattgaggagcgtggcccgttgattggc
ctcactgaggagacagactttgtcaacacagtgacgctgcaagcggctagctttgcggac
gagagtggccgaacgactgactctgttctcctgtaccacttggccggcgagtacgatacc
gtcgtggctattgtcagccgcgcgcttagtgaggctatttctctggagattggtgaagac
ccgatgcgtctgatgcccgtcaagcccagagccgctggggcggacgcagagtcccagcaa
ggtagcagtctcagtctagcatccattgacgaccccgtcgagctggccaagactatgatg
accatgtacgagcgggaggtcatgttttaccgcaagatccaagaccaaaataagacggcg
tgccgggttctcttggaaatgagcagtatcaagaagctggttgaggctggtcaatgggct
caaggtctggataaaatccgaggtcttgaaatcctacccctggatgctgccggcgaagca
agcaccattcgcgcctacgcatccaagttttctggcttatcgcagcctgtctccatcaac
gttccaaacctgctcatgtggacgattatatgctgcgttcgacagagggagcagctcacc
aatggacagtttagtggcaatgaaggcacaaggaagatgatggttgagcagttgaagcag
atgactttggatttgacgacgtatactagtcagttgcggtatagattcccgccgcatttg
cacgaggcgctggcgagggcgtcggcggagtga
DBGET
integrated database retrieval system