Penaeus chinensis (fleshy prawn): 125025046
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Entry
125025046 CDS
T08118
Name
(RefSeq) hrp65 protein-like isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pchn01009
]
125025046
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchn03021
]
125025046
03041 Spliceosome [BR:
pchn03041
]
125025046
Protein phosphatases and associated proteins [BR:
pchn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125025046
Transcription machinery [BR:
pchn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125025046
Spliceosome [BR:
pchn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125025046
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_ACIN1
RRM_7
RRM_occluded
SpecificRecomb
Motif
Other DBs
NCBI-GeneID:
125025046
NCBI-ProteinID:
XP_047468872
LinkDB
All DBs
Position
4:19640676..19714865
Genome browser
AA seq
669 aa
AA seq
DB search
MAMDAQQQNKNLEGVKKEAQTPKTNENGSDMDNFRGGRGGGRGSFRGNRGGGPGGPGGRG
GGNASAGSVQTSTPVPGGIGSLGQSNNLGQVAQGGGGGGGGGGGGGGGGGVGVVGGGVGG
GGGGGGGGARGGYNDRNERGGGGGFYRGGRGGRGGRGGGGGGGGGNFNQGDRDKFPHDRV
LERLKALSGPMIDLVPREENVRKFSNHCRLWVGNLPLDIKEDDVKELFKPFGEFDEVYFD
KNKGFAFVRMDYKSNAEKARQELHLKDYKGRQLKIRFSSPGTALKVRNLSTWVTNELLEK
AFSVFGELEKAVVITDERGRATGEGVVEFCKKPAANLALKKCQDGCFFMVSSPRPVIVEP
MAVVDDNEGMSEINVNKRNPEYIKERQQGPRFAQPGSFEYEYGLKWKQLYELFDKKKDSL
ERELTDEKRKLEEQIEYAKYEHDTEMLREQLRQREEMNQRTKSDFEQRQREWEEHRRQEE
ERQRRQEEELSMKFRQQEEELRRRQEENRQFMAERGNDLMKSENSQDSFGSGGYQGMEGS
NWRRTSDSYGTQGGSSWRGGGSDSWGRSAGAGSRGGVGSGTGQNWGDSAWDGRPDPWQSD
NRGSYQRGNSESELPPPPDPNTFLENFNRGRNFEQGANDYAGQRGRDAGRSRWGRNDRDD
YGPAKRARY
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggatgcgcagcagcagaacaagaacttggagggcgtcaagaaggaagctcag
acgcccaagaccaacgagaatggcagcgatatggacaatttccgaggtgggagaggaggc
ggccgcggcagcttccgtggcaaccggggcggaggacctggcggccctggaggacgaggc
ggcggcaatgcgtctgcgggctcagtgcaaacctccacaccggtgcccggaggtatcggc
agcctagggcagagtaacaatctcgggcaagttgctcagggcggtggcggcggcggcggt
ggtggcggtggcggcggcggcggcggcggcgtcggcgtcgttggcggcggcgttggcggc
ggcggcggcggcggcggcggcggggcgagaggaggctacaacgaccgcaatgaacgtggt
ggaggtggagggttttatcgtggcggcaggggcggccgtgggggtcgcggcggcggcgga
ggcggaggcggaggaaatttcaaccaaggcgacagagacaagttccctcatgatagggtt
ttagaacgtctgaaggccctctcaggaccaatgatcgacttagtgcctcgtgaagaaaat
gtccggaaattctcaaatcattgcagactttgggttggaaatcttcctcttgacatcaag
gaagatgatgttaaggaattgttcaaaccatttggagagtttgatgaagtgtactttgac
aagaataaaggctttgcatttgtgcggatggactataagagcaatgcagagaaagcaagg
caggagttacacctgaaggactacaagggtcggcaactgaagatcaggttttcttcacca
ggcacagccttgaaagtcaggaatctgtccacttgggtgacaaatgaattgctggagaag
gcatttagtgtttttggagagctagagaaagcagttgtgatcacagatgaacgtggtcgt
gctacaggtgaaggtgttgtggaattttgtaagaagccagctgctaatttggctctcaag
aagtgtcaggatggttgcttctttatggtatcgtcaccacgtccagttattgttgaacca
atggctgtagtggatgacaatgaaggcatgagtgagatcaatgtaaacaagcgaaacccc
gagtacatcaaggaaaggcaacaaggccctcgttttgctcagccaggatcctttgaatat
gagtatggcttaaaatggaagcagttgtatgaactatttgacaagaagaaagattctctg
gaaagggagttaactgatgagaagaggaaacttgaagagcagattgaatatgcaaaatat
gagcatgacacagaaatgttgagagaacagctgcgtcagagggaggaaatgaatcagcgc
actaagtcagactttgaacaacgccagcgtgaatgggaagaacatagacgtcaagaggag
gagcgtcaacggcgacaggaggaggagttgtcaatgaagttccgtcagcaggaagaggaa
ctgaggaggcgccaggaagagaacagacagtttatggcagaacggggaaatgatctaatg
aagagtgaaaacagccaagacagctttggcagtggtggctaccaagggatggaaggtagc
aactggcgacgcaccagtgacagttacggcacacaaggaggcagcagctggcgtggagga
ggaagcgactcctggggacgctcagctggtgcaggtagtcgaggaggtgttggtagtggc
actggccagaattggggagacagtgcatgggatggacgtccagacccttggcagagtgac
aaccgtggcagttaccagagaggcaacagtgagagtgagttgcctcctccaccggacccc
aacaccttcctggaaaacttcaaccgcgggcgtaactttgagcagggagccaatgactac
gctggccaaagaggccgagacgctgggcgcagcagatggggacgcaatgaccgagatgac
tacggcccagccaagagggctcgctactag
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