Penaeus chinensis (fleshy prawn): 125025904
Help
Entry
125025904 CDS
T08118
Name
(RefSeq) nuclear pore complex protein Nup107-like isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125025904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125025904
03036 Chromosome and associated proteins [BR:
pchn03036
]
125025904
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125025904
Chromosome and associated proteins [BR:
pchn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125025904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Ltn1_1st
Motif
Other DBs
NCBI-GeneID:
125025904
NCBI-ProteinID:
XP_047470189
LinkDB
All DBs
Position
5:38523341..38535584
Genome browser
AA seq
910 aa
AA seq
DB search
MSGVQNALLEDSLARLDAALGSPGGGVMRTPRAPRRTNPTGSKIGLDVISMVGEEPSPSF
SAPAVHASHIGMSMMDSPSMIMEDVTAPPIHATLLGDATLDITSAALLADDDPGVRATQV
LFSEFINIMVANPSESQVWQELEQYQSICAQQVEVLAKLLRKAPRHHANFTRTQQVYQQL
LSERNTWRLLGSLYMERMGEEENNRDSPMSGEEATTDLTVVTRLYDTNRTIREAQIVIDW
LEKNAADDFDRKFYDRVEYFGDTHIGWENTLKTLKSESSGVSIPFRGTRSLVTSLDPDAP
VRQGKPLHDLDHEDEMRLMRCVFAYVRSGQVAAAEELCVKAGHHWRAATLEGWKLHHDPN
PLNPSQRNPISGNPYRDVWKAVAWRAASDERLPQYERAIYGALCGHLQAVLGVCHEWQDV
LWAYSRTMVDQWVEEQLRGAATHLRPLHPLPKDFPEEKLSMKAVFEAVEQRPEVQQQRRN
NPYHLLQKYIILDDVENLLREAHVWLNDGLAPHLLRCLTHVVLFLRKIGRISQQQETLCT
DILEACVKESIERGDVEQVAWYTSVLPVWLQVEWYARFLHNISDDHHRRHALQLAATVGL
DTRAITSTVVTNIRLSGSRDPESEVVAETTGDDRVKISAIDWLLYDPKQRAEALRQANAL
LRTLLISRKIATAKILFKKIPSDSVNVIIQEHEAETGSRDLTIQSDNIVREYLCIRTFLD
AQDSFTDWFDHYHQKRPQPPKKPTAGSNFSQQVAYEQAEQQHNGELDRWKHTLSLITKTA
CDRLYNVLLFPEGGWLVDSGLDDQDVDTSAKDTSSSREMRLDNQEPDRAQQMSVLRSIYI
PQVTSLLQNILHSTENYKESVRLADIIASEQHQLYKAFGSCELQRFLIKLQETSRELLDR
NCDALGYPLQ
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggtacagaatgctctgctggaggattctttagcccggctcgatgctgctctt
ggctctcctggaggcggggtaatgaggaccccaagagccccccgaagaaccaatccaaca
ggaagcaagattggactggatgtcatatcaatggtcggagaggagccttctccttccttc
tcggcaccggcagtccatgcttctcacattggcatgagtatgatggacagccccagcatg
ataatggaggatgtaacagcacctccaatacatgcgacacttctgggtgatgctaccttg
gacatcacgagtgctgccctcctggctgatgatgatcccggtgtccgagcgactcaggtt
ctcttctcagagttcataaacataatggtggccaacccatccgagtcacaagtctggcag
gagctggaacagtaccagagcatttgtgcgcagcaggtggaggttctggccaagctcctc
cgtaaagcacccagacaccatgcgaatttcacacgcactcagcaggtgtaccagcagctt
cttagtgaacgaaacacttggagactcctgggatcactgtatatggagaggatgggagag
gaggagaataacagagattccccgatgtcaggagaagaagcaaccacagatttgacggtt
gtcacccgtctctatgacaccaaccgtactatcagagaggcccagattgtgattgactgg
ctggagaagaatgcagctgatgactttgaccggaaattttatgacagagttgaatatttt
ggtgatacccacattggttgggaaaacactctaaaaacactgaagagtgagagtagtgga
gtctccatacctttccgagggacacggtcattagtcacatctctagacccagatgcccct
gtgcgccaggggaaacctctgcacgaccttgaccatgaagacgagatgaggctgatgagg
tgtgtatttgcctatgtaaggtcgggtcaggtggcagcagcagaggagctttgtgtcaaa
gccggtcaccactggagagctgcgactctggaaggttggaagctccaccatgaccccaat
cctctgaacccctcccagcgcaacccaatttcgggaaatccgtacagggatgtgtggaag
gcagtagcctggcgagctgcaagtgatgaacgcttgcctcagtatgaacgtgcaatttat
ggggcactttgtggtcacctacaagcagttttaggagtgtgtcatgagtggcaggatgtc
ctctgggcatatagtcgcacaatggttgaccagtgggttgaggagcagcttcgaggggca
gctacacatctacgaccactgcacccactccccaaagatttcccagaagaaaagttgagc
atgaaggcagtgtttgaggctgttgagcaaaggccagaggtacagcagcagcgtcgcaac
aacccctatcacctcctgcagaagtacatcattcttgatgacgtggaaaacctcctccgc
gaagcccatgtctggctgaacgatggccttgctccacacctgctgcgctgcctcacacat
gtggtactcttcctcaggaaaataggaagaatctcccagcagcaagagaccctgtgcaca
gatatcttggaagcctgtgtcaaggaatctattgagcgaggtgatgtggaacaagtggct
tggtacacgtccgtcctgccagtgtggttgcaggtggaatggtacgctcgcttcctccac
aacatatcagacgaccaccaccggcgccacgccttgcagctggcagctactgttggcctc
gatacccgtgccataacctcaaccgtcgtgaccaacataagattgtcaggcagtcgtgac
ccagagagcgaggtagtcgcagagacaacgggagacgacagagttaaaatcagtgccatt
gactggctcttgtacgaccccaagcagagggcagaagctcttcgtcaagccaatgccctt
ttgcgaacacttctcatatccagaaaaattgctactgccaaaattttgttcaaaaagatt
cctagcgactcggttaacgtcataattcaagagcacgaagcagaaacggggtccagagac
ttgacaattcagtccgataatattgttcgggaatatctttgcatcaggactttcctggac
gcccaggactccttcaccgactggtttgaccactatcaccagaagaggccccaaccgcca
aagaagccaaccgcgggctccaacttctcccagcaggtggcgtacgagcaggcagagcag
cagcacaatggggagctggatcgatggaaacacacactgtccctcatcacaaaaacggca
tgcgaccgcctgtacaacgtgcttctgttccccgaggggggatggctggtcgactcaggc
ctggatgaccaggatgttgacacctctgctaaagatacgagcagtagcagggagatgaga
ctagacaaccaagagccagatcgggcccagcagatgtctgtgttacgctcaatctacatc
ccacaggtaacttccctgctgcaaaacattctacactcaacagaaaactacaaggaatca
gttagacttgcagacatcattgcatccgagcaacatcaactgtacaaggcctttggatcg
tgtgaactacagcggttcttgataaagcttcaggagacatcaagggaattgcttgaccgc
aactgcgacgccctcgggtacccactccagtaa
DBGET
integrated database retrieval system
