Penaeus chinensis (fleshy prawn): 125042474
Help
Entry
125042474 CDS
T08118
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125042474
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pchn01009
]
125042474
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchn04131
]
125042474
03029 Mitochondrial biogenesis [BR:
pchn03029
]
125042474
Protein phosphatases and associated proteins [BR:
pchn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125042474
Membrane trafficking [BR:
pchn04131
]
Autophagy
Autophagosome formation proteins
ULK complex
125042474
Mitochondrial biogenesis [BR:
pchn03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
125042474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
125042474
NCBI-ProteinID:
XP_047494069
LinkDB
All DBs
Position
32:complement(23866212..23898662)
Genome browser
AA seq
1380 aa
AA seq
DB search
MLYVFLVDTGTMMTFDMNLALENVSVLKEVIHRSMKVPPEKQVLLISGGEALDPSLRVCQ
YSAGTDTNPIFLFSKSTIEGQNPPSPSIDYGSDTDLQDQVEGALNMPASYNTVVARAQLA
QQFHEHSRDQTRICQQLVHDQHLQQQGWAAVVANLEDIVAAFKTRFESFEQSFNDYLKGR
EEKFTILENFDEDLKLLSRIPVLPALLGHTKKATEEGKLAEDTENEERKVDKGKDDDDSF
ETQVGMSLLEWISAKDSQNDVEKIAQLCFRGLTQINDGMLTQLAGEVNSVVREADRPEMK
EIKGLGDRLFGLEQLMHEANKIVQEQNNFAQALLQNQNRAGKVNDPSIFPDLCTSHRRNL
MHMLKNHQRVQDIKRRCIKAKEELSENLHVRLKWIMYIEKKLYELDNKLSMHRENVRRLT
GLLQVVEQIHRAPRVYVGAITEVARRHAFSQAFVQWATALSVESSEVWQREVTTRRHFLQ
QFSSHFLTSLFPGLDDLPPDFATQPPDKFDDTLPKLTGEDIEQLRSVLPELASLLFVGEV
VAVPPLLQTALNGRYTQTPRSSGTFVKEGSGDVYASAVTTANSATPRNTPDRDAVSRGQP
VRPSSLSREHQESETDTEEFEKVGCSAGSDGTFSPMEVMPEGRGSVKTKHHFPTQTSDSK
HIKLDGGSAQLPGTAQEELRQGSVAAVPPRDPPQSPESVVTSQEFVTAEFYIDESMPSSY
TESNGTTGTTASSTWHPPLVKTHHVITAELQKQLEDKDTAIFSLQSDLNQAKDEVDRLQQ
RLNALASLDCKDAVVSLKRELASLRGKVRDEGATYVNYISELSSRLLDVLLQIQVQTSAE
QSAAVNEAVTLARADKDKLQEQLQGTLDLQAHKLSDAQREIEMYQEQLHRHQENLQQTTA
EFEEVKRALIEEKNEAVKQLSLEHELEMVAMKERWQEEDSSRQEELTSLTQKLKGLEEVL
QRAESDRNALEKNFQERFEAHFQEEKDKIVQILEVSFSEREKKALESLKEQLTREHQEEV
SRLLSEKEEALRCACEEVRVKLVAEWREVVDKQHKDLSEKHAADLAKCKEQWDQEKQAEI
ATKVAEIETRWREERDTEIERVRQQYKMELEGLRSRFRMMTTASMDKSPSETSLEKFERG
EFMDLAAHEIALAKLREELLREKEAELETVKLALQEQFAQAQKEELQKHEEMRKEERRRI
EAEKQVVFNDAIKSVTQDKERVIEDLRLRVELLTDETEKLRRLMHNAATESSDQIMTALA
TENQSLKERCETLQKDIVRLENDLLRAKRFSFVTERQHDLSMSFTDAGPAGATGPITSSE
DVKKLQQENQELRDKLEVGRAEDDLDSGSRDVRKFKRIGDETRAIGVSDPKEGNGGGIPV
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgctttacgtatttcttgtggatacagggaccatgatgacctttgacatgaacttggca
ctggaaaatgtgtcagttctgaaagaggtcattcaccggtccatgaaggtacccccagag
aagcaagtcctgctcatctctgggggtgaggctcttgaccccagcctccgcgtgtgtcag
tattcggctggaacggataccaaccctattttcctcttctctaaatccacaatagagggg
caaaatcctccatccccaagcattgactatggctccgacactgatctacaggaccaggtt
gaaggtgcccttaacatgccagccagttacaacacagtggtggctcgagcccagcttgca
cagcagtttcacgaacactcaagagatcagacgagaatatgccagcagctagttcatgat
cagcacttgcagcagcagggttgggctgcagtagtagcaaatcttgaagatattgttgcg
gcatttaaaacacgttttgaaagctttgagcaaagcttcaatgattacttgaaaggtcgc
gaagagaagttcacaatcctagagaattttgatgaagacctcaagttgctgtccagaata
ccagtcctcccagctcttctaggacacacaaagaaggcaactgaggaaggaaaactggcc
gaggacacggagaatgaggaaagaaaagtagataaaggaaaagatgatgatgacagcttt
gaaactcaagttggcatgagtctcctagaatggattagcgcaaaagacagccagaacgat
gtagaaaagatagcacaactttgctttagaggccttactcagataaatgatggaatgctg
acacaactggcaggggaggtgaattctgtggtccgcgaggccgaccgtcccgagatgaag
gagataaaaggacttggggaccgactctttggcctggagcaactcatgcacgaagccaac
aagatcgtccaggaacaaaacaacttcgctcaggcacttttgcaaaaccaaaacagagct
ggaaaagtcaatgatccctccatcttcccggacctctgtacctcacaccgtagaaacctc
atgcacatgctcaagaaccatcaacgggtacaagacatcaagaggagatgcataaaggct
aaagaagaactctcagaaaatttgcacgtaagactgaagtggatcatgtacatagagaag
aagttgtatgaactagacaataagctgagtatgcatcgtgaaaatgtgcggcggctcact
gggctcttgcaagtggtcgagcagatccatcgtgctccccgagtatatgttggtgccatc
acagaagtggcacgccggcatgctttctcacaagcgtttgtgcagtgggcaacagcactg
agtgtggaaagtagcgaggtatggcaacgggaggtaactaccaggagacatttcttgcaa
caattctcgtcgcatttcctcactagcctcttccctggcctggatgaccttcctcccgac
tttgcaactcagcctccagacaaatttgatgacacactgccaaagttaacaggagaagac
atagaacagctgcgatcagtgctgcctgaattggcttctctcctatttgtgggagaagtt
gtggcagtgccacccttgctacaaacagctctaaatggaagatatacacaaactccaaga
agtagtggtacttttgtcaaggaaggcagtggtgatgtttatgcctctgctgtgaccaca
gctaattcggcaacgccacgtaacacacctgatcgtgatgcagtttctagagggcaacct
gtgcggccttcatctctttcaagagagcaccaagagtcagagacagacactgaagagttt
gaaaaggttggatgtagtgctgggagtgatggcactttttctcctatggaggttatgcca
gagggtcggggatctgtgaaaacaaagcaccacttcccaacacagacaagtgattctaaa
cacatcaagctagatggaggctctgcacagctgccaggaactgcacaggaggagctaagg
caggggagcgtagctgcagtgccccccagagatcccccgcagagccccgagtctgtggtg
acctcccaggagtttgtcacggctgaattctacattgatgagtcgatgccctccagctat
acggagagcaatggcacgacggggacaacggcgtccagcacctggcacccgccgcttgtg
aagacccaccacgtcatcaccgcagagttgcagaaacagctagaggacaaagacactgcc
attttctcgctacagagtgacctgaaccaggcaaaggatgaagtggacagattgcaacaa
cgactcaatgccttggcctccctggactgtaaggatgcagttgtcagtctcaaaagggag
ttggcgtctctcaggggaaaggttcgtgatgaaggagcaacttacgtcaactatatctca
gagttgtcctctcgtctcctagatgtgttgttacagatacaagtgcagacgtcagcggag
caaagtgcagcagtcaatgaggctgtcacgttagccagggcagataaggacaagttgcag
gagcagttgcagggaacgctggacttgcaggcccacaaactctcagatgcccagcgcgaa
attgaaatgtaccaagagcagttacaccgacaccaggaaaacttgcagcaaacaactgct
gagtttgaggaagtgaaaagagctttgatagaggaaaagaatgaggcagtgaagcagcta
agcctggagcacgagttagaaatggtggccatgaaggagcgatggcaagaagaggactcc
tcgcgacaggaggaacttacgtccttaactcagaaactgaagggccttgaggaggtccta
cagcgggcagagagcgaccgaaatgcgctggagaagaacttccaggagcggttcgaggct
cactttcaggaggagaaagataagatcgtgcagattttggaggtcagcttcagtgagcgc
gagaagaaagccctcgagagcctgaaggaacagctgactcgtgaacaccaggaggaagtg
agcagactgctaagtgaaaaagaagaggctctgaggtgtgcgtgtgaggaggtccgggtg
aagctggtagcagagtggagagaggtagtggataagcagcacaaagatctcagtgagaag
catgcagcagaccttgctaagtgtaaggagcagtgggaccaggagaaacaggcagagatt
gctaccaaagttgctgaaattgagacccgatggcgggaagaaagggacacagagattgag
cgagtgagacagcaatacaaaatggagcttgagggtctgcggtcacgatttagaatgatg
accactgccagcatggacaaatcaccttcagaaacgtctttggagaagtttgagcgtggt
gagtttatggacttggcagctcacgaaatagctcttgccaaactgagggaggaattgctg
cgagagaaggaagcagagctggagactgtcaagcttgctctacaagaacaatttgctcaa
gcacaaaaggaggaattacagaagcatgaagagatgaggaaagaggaaagaagaaggata
gaagcagaaaagcaggttgtgttcaatgatgccataaagtcagttacgcaagacaaggaa
agagtcattgaagacctcagactcagggtggagctcttgacggatgaaacagagaaattg
cgcaggctcatgcacaatgctgccacagagtcgagtgaccagataatgaccgctttggcc
acagagaaccagtcccttaaggaacgttgtgagaccttgcagaaggacattgtgagactt
gaaaatgacttgctccgggccaagagattcagctttgtcacagaacggcagcatgatctc
agcatgtccttcacagatgccggacctgcaggggcaacaggtcccattacaagcagtgag
gatgttaaaaagcttcaacaggaaaatcaggagctgagagataagctggaagtgggaagg
gcagaggatgaccttgactcgggaagtagggatgttaggaaattcaagcgaataggggat
gagactcgagccattggggtatcagatccgaaggagggaaacggcggaggaatcccggtg
tga
DBGET
integrated database retrieval system
